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Pathogen
Any pathogen
Acinetobacter baumannii ATCC 17978
Campylobacter jejuni subsp. jejuni 81-176
Escherichia coli CFT073
Escherichia coli M12
Escherichia coli O157:H7 str. EDL933
Haemophilus influenzae Rd KW20
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
Mycobacterium avium subsp. paratuberculosis K10
Porphyromonas gingivalis ATCC 33277
Salmonella enterica Serovar Typhimurium SL1344
Salmonella enterica Serovar Typhimurium ST4 74
Serratia marcescens Strain UMH9
Streptococcus pyogenes M1 5448
Vibrio cholerae O1 biovar El Tor str. N16961
Vibrio parahaemolyticus RIMD 2210633
Sorted by significance (p<0.05) and Fitness z-Scores (highest impact first):
Download Table
Pathogen
Locus
Protein
UniProt
Gene
Length
Product
p-Value
Fitness z-Score
Precise fitness z-Score
Escherichia coli CFT073
c3080
AAN81529.1
Q8FF26
purL
1295 aa
Phosphoribosylformylglycinamidine synthase
n.s.
●○○○○ -0.77
-0.765091642997745
Escherichia coli CFT073
c1460
AAN79929.1
A0A0H2V7I1
853 aa
Putative tail component of prophage
n.s.
●○○○○ -0.76
-0.76327178899378
Escherichia coli CFT073
c0562
AAN79040.1
Q8FKA2
cof
276 aa
Cof protein
n.s.
●○○○○ -0.76
-0.760836675121144
Escherichia coli CFT073
c0636
AAN79113.1
A0A0H2V5N2
purK
355 aa
Phosphoribosylaminoimidazole carboxylase ATPase subunit
n.s.
●○○○○ -0.76
-0.759859918919609
Escherichia coli CFT073
c0902
AAN79375.1
A0A0H2V7K0
42 aa
Hypothetical protein
n.s.
●○○○○ -0.76
-0.759595308114445
Escherichia coli CFT073
c4233
AAN82669.1
A0A0H2VE97
yhhZ
392 aa
Hypothetical protein yhhZ
n.s.
●○○○○ -0.76
-0.759246260530328
Escherichia coli CFT073
c1883
AAN80343.1
A0A0H2V9J6
652 aa
Conserved hypothetical protein
n.s.
●○○○○ -0.76
-0.758395231117563
Escherichia coli CFT073
c5242
AAN83664.1
A0A0H2VDV7
frdA
602 aa
Fumarate reductase flavoprotein subunit
n.s.
●○○○○ -0.76
-0.757367699674965
Escherichia coli CFT073
c3108
AAN81557.1
A0A0H2V9K0
yfiP
249 aa
Hypothetical protein yfiP
n.s.
●○○○○ -0.76
-0.756238592192622
Escherichia coli CFT073
c0767
AAN79240.1
A0A0H2V585
152 aa
Hypothetical protein
n.s.
●○○○○ -0.76
-0.755320460134724
Escherichia coli CFT073
c0989
AAN79462.1
A0A0H2V7S8
potH
314 aa
Putrescine transport system permease protein potH
n.s.
●○○○○ -0.76
-0.755142284843348
Escherichia coli CFT073
c3963
AAN82403.1
P0AFX1
hpf
95 aa
Probable sigma(54) modulation protein
n.s.
●○○○○ -0.75
-0.752788349417289
Escherichia coli CFT073
c2132
AAN80591.1
Q8FH10
chbG
252 aa
Hypothetical protein ydjC
n.s.
●○○○○ -0.75
-0.752513671984092
Escherichia coli CFT073
c2978
AAN81428.1
A0A0H2V9B2
eutG
404 aa
Ethanolamine utilization protein eutG
n.s.
●○○○○ -0.75
-0.751172232471256
Escherichia coli CFT073
c0248
AAN78738.1
P0AEZ8
mltD
452 aa
Membrane-bound lytic murein transglycosylase D precursor
n.s.
●○○○○ -0.75
-0.751026924091272
Escherichia coli CFT073
c0856
AAN79329.1
Q8FJQ2
bioF
384 aa
8-amino-7-oxononanoate synthase
n.s.
●○○○○ -0.75
-0.748558110052671
Escherichia coli CFT073
c5263
AAN83685.1
A0A0H2VG66
vacB
827 aa
Ribonuclease R
n.s.
●○○○○ -0.75
-0.74803564823578
Escherichia coli CFT073
c0726
AAN79199.1
P0AD66
mrdA
633 aa
Penicillin-binding protein 2
n.s.
●○○○○ -0.75
-0.74664450717684
Escherichia coli CFT073
c1170
AAN79638.1
A0A0H2V602
486 aa
Hypothetical protein yfjI
n.s.
●○○○○ -0.74
-0.742937149561392
Escherichia coli CFT073
c2178
AAN80637.1
A0A0H2V963
ydjJ
347 aa
Hypothetical zinc-type alcohol dehydrogenase-like protein ydjJ
n.s.
●○○○○ -0.74
-0.741522938890154
Escherichia coli CFT073
c3364
AAN81811.1
A0A0H2VA26
sdaC
429 aa
Serine transporter
n.s.
●○○○○ -0.74
-0.740490036621823
Escherichia coli CFT073
c3363
AAN81810.1
A0A0H2VBM9
475 aa
Hypothetical protein
n.s.
●○○○○ -0.74
-0.740490036621823
Escherichia coli CFT073
c1115
AAN79583.1
A0A0H2V5X4
hyaC
235 aa
Probable Ni/Fe-hydrogenase 1 B-type cytochrome subunit
n.s.
●○○○○ -0.74
-0.74043718129972
Escherichia coli CFT073
c3206
AAN81658.1
A0A0H2V9V0
271 aa
Hypothetical protein
n.s.
●○○○○ -0.74
-0.739252897987471
Escherichia coli CFT073
c3290
AAN81739.1
A0A0H2V9X6
hypE
336 aa
Hydrogenase isoenzymes formation protein hypE
n.s.
●○○○○ -0.74
-0.738814839609969
Escherichia coli CFT073
c0487
AAN78965.1
Q8FKE3
ddlA
364 aa
D-alanine--D-alanine ligase A
n.s.
●○○○○ -0.74
-0.738466507986953
Escherichia coli CFT073
c2173
AAN80632.1
A0A0H2V957
ydjE
475 aa
Hypothetical metabolite transport protein ydjE
n.s.
●○○○○ -0.74
-0.737969223667877
Escherichia coli CFT073
c2156
AAN80615.1
A0A0H2V7U4
ynjC
519 aa
Hypothetical ABC transporter permease protein ynjC
n.s.
●○○○○ -0.73
-0.734682083337237
Escherichia coli CFT073
c0688
AAN79163.1
A0A0H2V538
ybdL
386 aa
Hypothetical aminotransferase ybdL
n.s.
●○○○○ -0.73
-0.732115444870664
Escherichia coli CFT073
c3716
AAN82160.1
A0A0H2VB08
386 aa
Hypothetical protein
n.s.
●○○○○ -0.73
-0.728640714402385
Escherichia coli CFT073
c3717
AAN82161.1
A0A0H2VDE4
356 aa
Hypothetical protein
n.s.
●○○○○ -0.73
-0.728640714402385
Escherichia coli CFT073
c2374
AAN80833.1
Q8FGJ7
dgcQ
569 aa
Hypothetical protein yedQ
n.s.
●○○○○ -0.73
-0.728153626342372
Escherichia coli CFT073
c1003
AAN79476.1
A0A0H2V6H8
ybjU
333 aa
Low-specificity L-threonine aldolase
n.s.
●○○○○ -0.73
-0.727078076907203
Escherichia coli CFT073
c2299
AAN80758.1
A0A0H2V812
cheR
286 aa
Chemotaxis protein methyltransferase
n.s.
●○○○○ -0.73
-0.726344697514469
Escherichia coli CFT073
c0830
AAN79303.1
A0A0H2V5C2
aroG
350 aa
Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive
n.s.
●○○○○ -0.73
-0.725001273043286
Escherichia coli CFT073
c2830
AAN81284.1
A0A0H2V9A1
lrhA
312 aa
Probable transcriptional regulator lrhA
n.s.
●○○○○ -0.72
-0.724384502596818
Escherichia coli CFT073
c2599
AAN81055.1
A0A0H2V8S9
yegL
219 aa
Hypothetical protein yegL
n.s.
●○○○○ -0.72
-0.721540280141043
Escherichia coli CFT073
c1026
AAN79498.1
P0ACJ1
lrp
182 aa
Leucine-responsive Regulatory protein
n.s.
●○○○○ -0.72
-0.719565076041931
Escherichia coli CFT073
c0878
AAN79351.1
Q8FJN6
ybhG
332 aa
Hypothetical membrane protein ybhG
n.s.
●○○○○ -0.72
-0.718464203123088
Escherichia coli CFT073
c1272
AAN79746.1
A0A0H2V678
290 aa
Hypothetical protein yeeP
n.s.
●○○○○ -0.72
-0.715791336366945
Escherichia coli CFT073
c3068
AAN81518.1
A0A0H2V9I4
yphD
332 aa
Hypothetical ABC transporter permease protein yphD
n.s.
●○○○○ -0.72
-0.71571220930057
Escherichia coli CFT073
c3282
AAN81731.1
A0A0H2VA59
hycD
307 aa
Formate hydrogenlyase subunit 4
n.s.
●○○○○ -0.71
-0.713798848039347
Escherichia coli CFT073
c1004
AAN79477.1
A0A0H2V5N4
poxB
572 aa
Pyruvate dehydrogenase (cytochrome)
n.s.
●○○○○ -0.71
-0.710642305707292
Escherichia coli CFT073
c0879
AAN79352.1
A0A0H2V649
ybiH
227 aa
Hypothetical transcriptional regulator ybiH
n.s.
●○○○○ -0.71
-0.708958445575087
Escherichia coli CFT073
c2591
AAN81047.1
A0A0H2VB17
asmA
617 aa
Protein asmA precursor
n.s.
●○○○○ -0.71
-0.705090725002609
Escherichia coli CFT073
c2051
AAN80511.1
A0A0H2V9V7
ydhP
389 aa
Hypothetical transport protein ydhP
n.s.
●○○○○ -0.7
-0.702379376652336
Escherichia coli CFT073
c5144
AAN83566.1
A0A0H2VFY7
499 aa
Hypothetical protein
n.s.
●○○○○ -0.7
-0.702379376652336
Escherichia coli CFT073
c3122
AAN81572.1
A0A0H2V9U5
aroF
379 aa
Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive
n.s.
●○○○○ -0.7
-0.702379376652335
Escherichia coli CFT073
c1169
AAN79637.1
A0A0H2V5W7
alpA
82 aa
Prophage CP4-57 Regulatory protein alpA
n.s.
●○○○○ -0.7
-0.702379376652332
Escherichia coli CFT073
c1150
AAN79618.1
P0ACU3
rutR
221 aa
Hypothetical transcriptional regulator ycdC
n.s.
●○○○○ -0.7
-0.70237937665233
Escherichia coli CFT073
c4739
AAN83172.1
A0A0H2VCM3
282 aa
Conserved hypothetical protein
n.s.
●○○○○ -0.7
-0.700772616130425
Escherichia coli CFT073
c0319
AAN78807.1
A0A0H2V4G7
390 aa
Putative oligogalacturonide lyase
n.s.
●○○○○ -0.7
-0.698532722823392
Escherichia coli CFT073
c1586
AAN80054.1
A0A0H2V6S3
216 aa
Hypothetical protein
n.s.
●○○○○ -0.7
-0.697457613736633
Escherichia coli CFT073
c0598
AAN79076.1
A0A0H2V5J8
ybaL
558 aa
Hypothetical protein ybaL
n.s.
●○○○○ -0.7
-0.696122126935752
Escherichia coli CFT073
c4334
AAN82770.1
A0A0H2VBU7
yhjE
440 aa
Hypothetical metabolite transport protein yhjE
n.s.
●○○○○ -0.7
-0.695781098741962
Escherichia coli CFT073
c3564
AAN82012.1
A0A0H2VAG8
490 aa
Hypothetical protein
n.s.
●○○○○ -0.69
-0.692372385044211
Escherichia coli CFT073
c5431
AAN83851.1
A0A0H2VE93
423 aa
Hypothetical protein
n.s.
●○○○○ -0.69
-0.688887345062194
Escherichia coli CFT073
c0491
AAN78969.1
P0AFM5
psiF
112 aa
Phosphate starvation-inducible protein psiF precursor
n.s.
●○○○○ -0.69
-0.688641288272911
Escherichia coli CFT073
c3210
AAN81662.1
A0A0H2VA09
gabT
428 aa
4-aminobutyrate aminotransferase
n.s.
●○○○○ -0.69
-0.687462434183411
Escherichia coli CFT073
c3310
AAN81759.1
Q8FEJ8
pcm
208 aa
Protein-L-isoaspartate O-methyltransferase
n.s.
●○○○○ -0.69
-0.686294550181575
Escherichia coli CFT073
c0780
AAN79253.1
A0A0H2V7C4
kdpD
895 aa
Sensor protein kdpD
n.s.
●○○○○ -0.68
-0.683814462438645
Escherichia coli CFT073
c2696
AAN81152.1
Q8FFT8
rihB
313 aa
Hypothetical protein yeiK
n.s.
●○○○○ -0.68
-0.681968623549323
Escherichia coli CFT073
c2923
AAN81373.1
A0A0H2V9G3
ypdE
345 aa
Hypothetical protein ypdE
n.s.
●○○○○ -0.68
-0.680384958967424
Escherichia coli CFT073
c2430
AAN80889.1
A0A0H2V9Q1
366 aa
Hypothetical protein
n.s.
●○○○○ -0.68
-0.680089686686722
Escherichia coli CFT073
c1002
AAN79475.1
A0A0H2V5Q7
ybjT
501 aa
Hypothetical protein ybjT
n.s.
●○○○○ -0.68
-0.67775407666419
Escherichia coli CFT073
c2769
AAN81223.1
A0A0H2V8Z4
yfaQ
549 aa
Hypothetical protein yfaQ precursor
n.s.
●○○○○ -0.68
-0.675314279763566
Escherichia coli CFT073
c2781
AAN81235.1
A0A0H2V903
glpT
452 aa
Glycerol-3-phosphate transporter
n.s.
●○○○○ -0.67
-0.674536208287853
Escherichia coli CFT073
c3955
AAN82395.1
P63387
mlaF
269 aa
Hypothetical ABC transporter ATP-binding protein yrbF
n.s.
●○○○○ -0.67
-0.672224478229769
Escherichia coli CFT073
c0542
AAN79020.1
P0ABI9
cyoB
663 aa
Ubiquinol oxidase polypeptide I
n.s.
●○○○○ -0.67
-0.671715289115052
Escherichia coli CFT073
c0743
AAN79216.1
P0AE79
corC
292 aa
Magnesium and cobalt efflux protein corC
n.s.
●○○○○ -0.67
-0.670266458636774
Escherichia coli CFT073
c3702
AAN82148.1
A0A0H2VAU1
137 aa
Hypothetical protein
n.s.
●○○○○ -0.67
-0.669193632327103
Escherichia coli CFT073
c0530
AAN79008.1
A0A0H2V5H6
yajO
324 aa
Hypothetical oxidoreductase yajO
n.s.
●○○○○ -0.66
-0.664817704558469
Escherichia coli CFT073
c1418
AAN79887.1
A0A0H2V6F4
72 aa
Hypothetical protein
n.s.
●○○○○ -0.66
-0.66395494943779
Escherichia coli CFT073
c2691
AAN81147.1
A0A0H2VB81
lysP
489 aa
Lysine-specific permease
n.s.
●○○○○ -0.66
-0.663498270011448
Escherichia coli CFT073
c1274
AAN79748.1
A0A0H2V650
840 aa
Hypothetical protein yeeR
n.s.
●○○○○ -0.66
-0.662545845812259
Escherichia coli CFT073
c3554
AAN82002.1
A0A0H2VAG0
67 aa
Hypothetical protein
n.s.
●○○○○ -0.66
-0.661659201488251
Escherichia coli CFT073
c0906
AAN79379.1
P0A9U4
ybiT
530 aa
Hypothetical ABC transporter ATP-binding protein ybiT
n.s.
●○○○○ -0.66
-0.661659201488241
Escherichia coli CFT073
c3393
AAN81838.1
A0A0H2VBP9
824 aa
Hypothetical protein
n.s.
●○○○○ -0.66
-0.660732186265482
Escherichia coli CFT073
c0194
AAN78688.1
Q8CWD2
btuF
266 aa
Vitamin B12 transport protein btuF precursor
n.s.
●○○○○ -0.66
-0.660398443531483
Escherichia coli CFT073
c0791
AAN79264.1
A0A0H2V5Z3
ybgK
310 aa
Hypothetical protein ybgK
n.s.
●○○○○ -0.66
-0.660261175722116
Escherichia coli CFT073
c3237
AAN81689.1
P0ACS0
mprA
176 aa
Transcriptional repressor mprA
n.s.
●○○○○ -0.66
-0.657715698044083
Escherichia coli CFT073
c1948
AAN80405.1
A0A0H2V7D8
yneI
470 aa
Aldehyde-dehydrogenase like protein yneI
n.s.
●○○○○ -0.66
-0.657312257553411
Escherichia coli CFT073
c0957
AAN79430.1
A0A0H2V5M2
170 aa
Fels-2 prophage: probable prophage lysozyme
n.s.
●○○○○ -0.66
-0.656479067643147
Escherichia coli CFT073
c3076
AAN81525.1
P0A9Z2
glnB
112 aa
Nitrogen Regulatory protein P-II 1
n.s.
●○○○○ -0.66
-0.656479067643147
Escherichia coli CFT073
c2663
AAN81119.1
A0A0H2V8S7
bglX
765 aa
Periplasmic beta-glucosidase precursor
n.s.
●○○○○ -0.66
-0.656479067643147
Escherichia coli CFT073
c1006
AAN79479.1
Q8FJE0
hcp
552 aa
Prismane protein homolog
n.s.
●○○○○ -0.65
-0.654925484468567
Escherichia coli CFT073
c1423
AAN79892.1
A0A0H2V6F7
349 aa
Hypothetical protein ydfU
n.s.
●○○○○ -0.65
-0.654925484468559
Escherichia coli CFT073
c4042
AAN82480.1
Q8FD18
aroE
272 aa
Shikimate 5-dehydrogenase
n.s.
●○○○○ -0.65
-0.654835114031592
Escherichia coli CFT073
c3450
AAN81895.1
P65808
ygeY
403 aa
Hypothetical protein ygeY
n.s.
●○○○○ -0.65
-0.65060828177131
Escherichia coli CFT073
c3300
AAN81749.1
A0A0H2VBI9
ygbM
258 aa
Hypothetical protein ygbM
n.s.
●○○○○ -0.65
-0.649698469534601
Escherichia coli CFT073
c0880
AAN79353.1
A0A0H2V5F2
rhlE
453 aa
Putative ATP-dependent RNA helicase rhlE
n.s.
●○○○○ -0.65
-0.649202603689739
Escherichia coli CFT073
c2467
AAN80926.1
A0A0H2V8E7
289 aa
Putative 3-hydroxyacyl-CoA dehydrogenase
n.s.
●○○○○ -0.65
-0.649093568947772
Escherichia coli CFT073
c2468
AAN80927.1
A0A0H2V8M8
869 aa
Putative polyketide synthase
n.s.
●○○○○ -0.65
-0.648676051675692
Escherichia coli CFT073
c3179
AAN81631.1
A0A0H2V9S4
ydfP
165 aa
Hypothetical protein ydfP precursor
n.s.
●○○○○ -0.65
-0.648259245611719
Escherichia coli CFT073
c2768
AAN81222.1
A0A0H2VAG6
yfaP
258 aa
Hypothetical protein yfaP precursor
n.s.
●○○○○ -0.65
-0.64792111310883
Escherichia coli CFT073
c1686
AAN80153.1
A0A0H2V6X0
narH
512 aa
Respiratory nitrate reductase 1 beta chain
n.s.
●○○○○ -0.65
-0.646795940778449
Escherichia coli CFT073
c4466
AAN82902.1
P0A7E4
pyrE
218 aa
Orotate phosphoribosyltransferase
n.s.
●○○○○ -0.65
-0.645847992535158
Escherichia coli CFT073
c0456
AAN78935.1
A0A0H2V4N7
codA
432 aa
Cytosine deaminase
n.s.
●○○○○ -0.65
-0.645715248044592
Escherichia coli CFT073
c3434
AAN81879.1
A0A0H2VBS6
galR
343 aa
Galactose operon repressor
n.s.
●○○○○ -0.64
-0.644912581163884
Escherichia coli CFT073
c1114
AAN79582.1
A0A0H2V5S8
hyaB
597 aa
Hydrogenase-1 large chain
n.s.
●○○○○ -0.64
-0.642181379335639
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