BacFITBase
Search
BLAST
Browse
(current)
Download
Tutorial
About
Search
Browse BacFITBase
Pathogen
Any pathogen
Acinetobacter baumannii ATCC 17978
Campylobacter jejuni subsp. jejuni 81-176
Escherichia coli CFT073
Escherichia coli M12
Escherichia coli O157:H7 str. EDL933
Haemophilus influenzae Rd KW20
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
Mycobacterium avium subsp. paratuberculosis K10
Porphyromonas gingivalis ATCC 33277
Salmonella enterica Serovar Typhimurium SL1344
Salmonella enterica Serovar Typhimurium ST4 74
Serratia marcescens Strain UMH9
Streptococcus pyogenes M1 5448
Vibrio cholerae O1 biovar El Tor str. N16961
Vibrio parahaemolyticus RIMD 2210633
Sorted by significance (p<0.05) and Fitness z-Scores (highest impact first):
Download Table
Pathogen
Locus
Protein
UniProt
Gene
Length
Product
p-Value
Fitness z-Score
Precise fitness z-Score
Escherichia coli CFT073
c3323
AAN81772.1
Q8FEI7
cysJ
599 aa
Sulfite reductase [NADPH] flavoprotein alpha-component
n.s.
●○○○○ -0.06
-0.0564770255684896
Escherichia coli CFT073
c0412
AAN78893.1
A0A0H2V4L9
322 aa
Hypothetical transcriptional regulator ycjZ
n.s.
●○○○○ -0.06
-0.0555313334594333
Escherichia coli CFT073
c1309
AAN79782.1
P0A8D7
ymdB
177 aa
Hypothetical protein ymdB
n.s.
●○○○○ -0.05
-0.0545723159048703
Escherichia coli CFT073
c3952
AAN82392.1
A0A0H2VCU1
yrbC
211 aa
Protein yrbC precursor
n.s.
●○○○○ -0.05
-0.0535403839179199
Escherichia coli CFT073
c3950
AAN82390.1
A0A0H2VDV3
yrbB
129 aa
Hypothetical protein yrbB
n.s.
●○○○○ -0.05
-0.0535403839179199
Escherichia coli CFT073
c3951
AAN82391.1
A0A0H2VB99
211 aa
Hypothetical protein
n.s.
●○○○○ -0.05
-0.0535403839179199
Escherichia coli CFT073
c5435
AAN83855.1
A0A0H2VDS7
557 aa
Putative Na(+)/H(+) exchanger yjcE
n.s.
●○○○○ -0.05
-0.0499854137514582
Escherichia coli CFT073
c0377
AAN78858.1
A0A0H2V4K4
fhiA
579 aa
FhiA protein
n.s.
●○○○○ -0.05
-0.0488018336225654
Escherichia coli CFT073
c3169
AAN81621.1
A0A0H2V9N9
112 aa
Putative head-DNA stabilization protein of prophage
n.s.
●○○○○ -0.05
-0.0481013714757081
Escherichia coli CFT073
c5299
AAN83720.1
A0A0H2VG88
690 aa
Putative oxidoreductase
n.s.
●○○○○ -0.05
-0.0472857799762654
Escherichia coli CFT073
c2811
AAN81265.1
A0A0H2V948
elaA
153 aa
Protein elaA
n.s.
●○○○○ -0.05
-0.0464317828566564
Escherichia coli CFT073
c2698
AAN81154.1
A0A0H2V8U8
yeiM
416 aa
Hypothetical transport protein yeiM
n.s.
●○○○○ -0.04
-0.0424398021374947
Escherichia coli CFT073
c3867
AAN82310.1
Q8FDC6
yhaM
436 aa
Conserved hypothetical protein
n.s.
●○○○○ -0.04
-0.0414052822847403
Escherichia coli CFT073
c4883
AAN83311.1
A0A0H2VCT2
menA
312 aa
1,4-dihydroxy-2-naphthoate octaprenyltransferase
n.s.
●○○○○ -0.04
-0.0404251588603221
Escherichia coli CFT073
c1384
AAN79854.1
A0A0H2V4J6
169 aa
Hypothetical protein
n.s.
●○○○○ -0.04
-0.0400376787442078
Escherichia coli CFT073
c1288
AAN79761.1
A0A0H2V687
126 aa
Hypothetical protein yeeV
n.s.
●○○○○ -0.04
-0.0399117828309525
Escherichia coli CFT073
c3199
AAN81651.1
A0A0H2VA00
227 aa
Hypothetical protein
n.s.
●○○○○ -0.04
-0.0378772752005693
Escherichia coli CFT073
c3883
AAN82324.1
A0A0H2VBE4
yhaG
523 aa
D-galactarate dehydratase
n.s.
●○○○○ -0.04
-0.0377420562257674
Escherichia coli CFT073
c3555
AAN82003.1
A0A0H2VBZ9
yqgA
235 aa
Hypothetical protein yqgA
n.s.
●○○○○ -0.04
-0.0368181361070594
Escherichia coli CFT073
c3187
AAN81639.1
A0A0H2V9Q2
331 aa
Hypothetical protein ydfU
n.s.
●○○○○ -0.04
-0.0362447735316517
Escherichia coli CFT073
c2282
AAN80739.1
A0A0H2VAB0
yecE
272 aa
Hypothetical protein yecE
n.s.
●○○○○ -0.04
-0.035509687602572
Escherichia coli CFT073
c4247
AAN82683.1
A0A0H2VEA8
livH
308 aa
High-affinity branched-chain amino acid transport system permease protein livH
n.s.
●○○○○ -0.04
-0.0354251481525079
Escherichia coli CFT073
c3322
AAN81771.1
Q8FEI8
cysI
570 aa
Sulfite reductase [NADPH] hemoprotein beta-component
n.s.
●○○○○ -0.03
-0.0339748246040446
Escherichia coli CFT073
c3216
AAN81668.1
A0A0H2V9S3
ygaV
99 aa
Hypothetical transcriptional regulator ygaV
n.s.
●○○○○ -0.03
-0.0334315651039676
Escherichia coli CFT073
c0339
AAN78827.1
A0A0H2V4I6
50 aa
Hypothetical protein
n.s.
●○○○○ -0.03
-0.0325926903533977
Escherichia coli CFT073
c0686
AAN79161.1
P0AAT0
ybdD
65 aa
Hypothetical protein yjiX
n.s.
●○○○○ -0.03
-0.032030993116413
Escherichia coli CFT073
c3261
AAN81712.1
A0A0H2VCC1
srlR
257 aa
Glucitol operon repressor
n.s.
●○○○○ -0.03
-0.0313189641937713
Escherichia coli CFT073
c3996
AAN82436.1
Q8FD50
aaeA
310 aa
Hypothetical protein yhcQ
n.s.
●○○○○ -0.03
-0.0299669320233839
Escherichia coli CFT073
c0255
AAN78745.1
A0A0H2V4B1
148 aa
Hypothetical protein
n.s.
●○○○○ -0.03
-0.0292488819945433
Escherichia coli CFT073
c3804
AAN82249.1
A0A0H2VAY9
ydcM
401 aa
Hypothetical protein ydcM
n.s.
●○○○○ -0.03
-0.0283593293048991
Escherichia coli CFT073
c0495
AAN78973.1
P0A6E2
aroL
174 aa
Shikimate kinase II
n.s.
●○○○○ -0.03
-0.0282023857596514
Escherichia coli CFT073
c5122
AAN83546.1
A0A0H2VEW1
adiA
756 aa
Biodegradative arginine decarboxylase
n.s.
●○○○○ -0.03
-0.0281154411187293
Escherichia coli CFT073
c2474
AAN80933.1
A0A0H2VAT7
75 aa
Transposase
n.s.
●○○○○ -0.03
-0.0276317738190166
Escherichia coli CFT073
c1289
AAN79762.1
A0A0H2V745
162 aa
Unknown protein encoded within prophage
n.s.
●○○○○ -0.03
-0.0268358340271748
Escherichia coli CFT073
c5220
AAN83642.1
P0ABN6
dcuA
433 aa
Anaerobic C4-dicarboxylate transporter dcuA
n.s.
●○○○○ -0.03
-0.0260898804455366
Escherichia coli CFT073
c5061
AAN83487.1
A0A0H2VD76
229 aa
Hypothetical protein
n.s.
●○○○○ -0.03
-0.0258149005427844
Escherichia coli CFT073
c4718
AAN83151.1
A0A0H2VCJ0
aslB
411 aa
Putative arylsulfatase Regulatory protein
n.s.
●○○○○ -0.03
-0.0256927702003865
Escherichia coli CFT073
c0575
AAN79053.1
A0A0H2V6Y3
ylaB
518 aa
Hypothetical protein ylaB
n.s.
●○○○○ -0.03
-0.0254118006194536
Escherichia coli CFT073
c0508
AAN78986.1
A0A0H2V4S2
phoB
229 aa
Phosphate regulon transcriptional Regulatory protein phoB
n.s.
●○○○○ -0.02
-0.024316512186793
Escherichia coli CFT073
c3529
AAN81977.1
P0AEP2
galP
468 aa
Galactose-proton symporter
n.s.
●○○○○ -0.02
-0.0241704336127575
Escherichia coli CFT073
c4341
AAN82777.1
A0A0H2VDE8
yhjK
662 aa
Protein yhjK
n.s.
●○○○○ -0.02
-0.0240598678660618
Escherichia coli CFT073
c0124
AAN78622.1
P60561
guaC
347 aa
GMP reductase
n.s.
●○○○○ -0.02
-0.0227024838509124
Escherichia coli CFT073
c5444
AAN83864.1
A0A0H2VDT0
yjjQ
241 aa
Hypothetical protein yjjQ
n.s.
●○○○○ -0.02
-0.0225716301651772
Escherichia coli CFT073
c4147
AAN82585.1
A0A0H2VBD5
yhfT
434 aa
Hypothetical protein yhfT
n.s.
●○○○○ -0.02
-0.0225613850728134
Escherichia coli CFT073
c4196
AAN82634.1
Q8CXX5
malT
901 aa
MalT Regulatory protein
n.s.
●○○○○ -0.02
-0.0193747592279573
Escherichia coli CFT073
c5384
AAN83806.1
A0A0H2VE64
130 aa
Hypothetical protein
n.s.
●○○○○ -0.02
-0.0181667902483412
Escherichia coli CFT073
c2497
AAN80953.1
A0A0H2V8G8
285 aa
Transposase
n.s.
●○○○○ -0.02
-0.0176354221342422
Escherichia coli CFT073
c4964
AAN83392.1
Q8FB68
purH
529 aa
Purine biosynthesis protein PurH
n.s.
●○○○○ -0.02
-0.0172603895940298
Escherichia coli CFT073
c2427
AAN80886.1
A0A0H2V8J3
731 aa
Putative peptide/polyketide synthetase protein
n.s.
●○○○○ -0.01
-0.0148489486413522
Escherichia coli CFT073
c2956
AAN81406.1
Q8FFB3
cysA
365 aa
Sulfate transport ATP-binding protein cysA
n.s.
●○○○○ -0.01
-0.0146825210349321
Escherichia coli CFT073
c3792
AAN82236.1
A0A0H2VDL7
yqiG
840 aa
Hypothetical outer membrane usher protein yqiG precursor
n.s.
●○○○○ -0.01
-0.0139184916587408
Escherichia coli CFT073
c4444
AAN82880.1
A0A0H2VCB0
kbl
398 aa
2-amino-3-ketobutyrate coenzyme A ligase
n.s.
●○○○○ -0.01
-0.0133832600102461
Escherichia coli CFT073
c5421
AAN83841.1
A0A0H2VDW0
739 aa
Hypothetical protein
n.s.
●○○○○ -0.01
-0.00961611698276507
Escherichia coli CFT073
c0084
AAN78580.1
A0A0H2V3Z4
tbpA
331 aa
Thiamine-binding periplasmic protein precursor
n.s.
●○○○○ -0.01
-0.00853086545866273
Escherichia coli CFT073
c4996
AAN83422.1
A0A0H2VDC5
yjbG
245 aa
Hypothetical protein yjbG precursor
n.s.
●○○○○ -0.01
-0.00786574511407818
Escherichia coli CFT073
c3255
AAN81706.1
A0A0H2VA40
mltB
396 aa
Membrane-bound lytic murein transglycosylase B precursor
n.s.
●○○○○ -0.01
-0.00726940375753544
Escherichia coli CFT073
c0340
AAN78828.1
A0A0H2V6E3
219 aa
Conserved hypothetical protein
n.s.
●○○○○ -0.01
-0.0069079507900762
Escherichia coli CFT073
c4947
AAN83375.1
Q8FB81
thiG
261 aa
Thiazole biosynthesis protein thiG
n.s.
●○○○○ -0.01
-0.00564648908894543
Escherichia coli CFT073
c1439
AAN79908.1
A0A0H2V6H0
186 aa
Hypothetical protein
n.s.
●○○○○ -0
-0.004637826461683
Escherichia coli CFT073
c0581
AAN79059.1
A0A0H2V4Y7
acrA
409 aa
Acriflavine resistance protein A precursor
n.s.
●○○○○ -0
-0.00352351234393826
Escherichia coli CFT073
c1981
AAN80441.1
A0A0H2V7J0
ynfH
284 aa
Anaerobic dimethyl sulfoxide reductase chain ynfH
n.s.
●○○○○ -0
-0.00309580193457018
Escherichia coli CFT073
c4671
AAN83103.1
P0ACI7
asnC
152 aa
Regulatory protein asnC
n.s.
●○○○○ -0
-0.000267437003701848
Escherichia coli CFT073
c3191
AAN81643.1
A0A0H2VBA5
yfdN
164 aa
Hypothetical protein yfdN
n.s.
○○○○○ 0
0.000232215881938726
Escherichia coli CFT073
c3189
AAN81641.1
A0A0H2VC83
129 aa
Hypothetical protein
n.s.
○○○○○ 0
0.000384267138101548
Escherichia coli CFT073
c0964
AAN79437.1
A0A0H2V5L1
119 aa
Phage baseplate assembly protein
n.s.
○○○○○ 0
0.00104161457576306
Escherichia coli CFT073
c3347
AAN81795.1
P0AG21
relA
744 aa
GTP pyrophosphokinase
n.s.
○○○○○ 0
0.00270190821021469
Escherichia coli CFT073
c0374
AAN78855.1
A0A0H2V6I4
yafK
246 aa
Hypothetical protein yafK precursor
n.s.
○○○○○ 0
0.00455627577514388
Escherichia coli CFT073
c3146
AAN81596.1
P0ADI1
pinR
196 aa
Putative DNA-invertase from lambdoid prophage Rac
n.s.
○○○○○ 0
0.00484034448004681
Escherichia coli CFT073
c4530
AAN82964.1
A0A0H2VC85
tdcD
406 aa
Propionate kinase
n.s.
○○○○○ 0.01
0.00517944097386809
Escherichia coli CFT073
c3500
AAN81948.1
A0A0H2VAA7
yggE
246 aa
Hypothetical protein yggE
n.s.
○○○○○ 0.01
0.00527096489170524
Escherichia coli CFT073
c3357
AAN81804.1
Q8FEF9
truC
260 aa
Hypothetical protein yqcB
n.s.
○○○○○ 0.01
0.00569276490086559
Escherichia coli CFT073
c0515
AAN78993.1
Q8FKC5
queA
356 aa
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
n.s.
○○○○○ 0.01
0.00596317900110423
Escherichia coli CFT073
c4098
AAN82536.1
A0A0H2VBB1
hofF
398 aa
Putative general secretion pathway protein F
n.s.
○○○○○ 0.01
0.0067938625882575
Escherichia coli CFT073
c3890
AAN82331.1
A0A0H2VCR4
294 aa
PTS system, N-acetylgalactosamine-specific IID component
n.s.
○○○○○ 0.01
0.00704403132858814
Escherichia coli CFT073
c5147
AAN83569.1
A0A0H2VD84
65 aa
Conserved hypothetical protein
n.s.
○○○○○ 0.01
0.00712654455248875
Escherichia coli CFT073
c1033
AAN79505.1
A0A0H2V5T5
dmsC
287 aa
Anaerobic dimethyl sulfoxide reductase chain C
n.s.
○○○○○ 0.01
0.00798019712666839
Escherichia coli CFT073
c2752
AAN81206.1
A0A0H2V8X9
yojI
547 aa
Hypothetical ABC transporter ATP-binding protein yojI
n.s.
○○○○○ 0.01
0.0092402186691348
Escherichia coli CFT073
c0536
AAN79014.1
A0A0H2V6V7
apbA
303 aa
2-dehydropantoate 2-reductase
n.s.
○○○○○ 0.01
0.00936523320382986
Escherichia coli CFT073
c0765
AAN79238.1
A0A0H2V7B4
253 aa
Putative transcriptional regulator
n.s.
○○○○○ 0.01
0.0100342410769424
Escherichia coli CFT073
c0071
AAN78567.1
A0A0H2V3Y2
polB
783 aa
DNA polymerase II
n.s.
○○○○○ 0.01
0.011737508776522
Escherichia coli CFT073
c0506
AAN78984.1
A0A0H2V4U1
sbcD
400 aa
Nuclease sbcCD subunit D
n.s.
○○○○○ 0.01
0.013664231998052
Escherichia coli CFT073
c0564
AAN79042.1
P0ACJ6
decR
188 aa
Hypothetical transcriptional regulator ybaO
n.s.
○○○○○ 0.02
0.0153014378849729
Escherichia coli CFT073
c3295
AAN81744.1
A0A0H2VBI3
pphB
218 aa
Serine/threonine protein phosphatase 2
n.s.
○○○○○ 0.02
0.0176605346820196
Escherichia coli CFT073
c0763
AAN79236.1
A0A0H2V576
376 aa
Putative inner membrane protein
n.s.
○○○○○ 0.02
0.0188989190797872
Escherichia coli CFT073
c1287
AAN79760.1
A0A0H2V8A2
55 aa
Hypothetical protein
n.s.
○○○○○ 0.02
0.0192251920362175
Escherichia coli CFT073
c3411
AAN81856.1
P63884
amiC
447 aa
N-acetylmuramoyl-L-alanine amidase amiC precursor
n.s.
○○○○○ 0.02
0.0212154242906816
Escherichia coli CFT073
c3154
AAN81606.1
A0A0H2V9M6
1159 aa
Putative tail component of prophage
n.s.
○○○○○ 0.02
0.0220697182423568
Escherichia coli CFT073
c4789
AAN83222.1
Q8FBI4
rfaH
162 aa
Transcriptional activator rfaH
n.s.
○○○○○ 0.02
0.0225288873060288
Escherichia coli CFT073
c4877
AAN83305.1
P0A9D0
glpX
336 aa
Protein glpX
n.s.
○○○○○ 0.02
0.0228427329852596
Escherichia coli CFT073
c3639
AAN82087.1
Q8FDU7
nanA2
305 aa
N-acetylneuraminate lyase subunit
n.s.
○○○○○ 0.02
0.0248219383092922
Escherichia coli CFT073
c3003
AAN81453.1
P64430
ypfJ
287 aa
Hypothetical protein ypfJ
n.s.
○○○○○ 0.02
0.0249177833562656
Escherichia coli CFT073
c4192
AAN82630.1
A0A0H2VBK4
gntT
438 aa
High-affinity gluconate transporter
n.s.
○○○○○ 0.03
0.0273677080199779
Escherichia coli CFT073
c5429
AAN83849.1
A0A0H2VFF6
yjiY
721 aa
Hypothetical protein yjiY
n.s.
○○○○○ 0.03
0.0276370076436012
Escherichia coli CFT073
c3814
AAN82259.1
Q8FDG7
ttdT
487 aa
Putative tartrate carrier/transporter
n.s.
○○○○○ 0.03
0.0278490637638515
Escherichia coli CFT073
c0607
AAN79085.1
Q8FK74
cueR
135 aa
Transcriptional regulator cueR
n.s.
○○○○○ 0.03
0.0283461190787185
Escherichia coli CFT073
c1012
AAN79485.1
A0A0H2V5S6
ybjX
330 aa
Hypothetical protein ybjX
n.s.
○○○○○ 0.03
0.0286672428560162
Escherichia coli CFT073
c4424
AAN82860.1
A0A0H2VCA1
upaG
1778 aa
Putative adhesin
n.s.
○○○○○ 0.03
0.0301111002594913
Escherichia coli CFT073
c2810
AAN81264.1
P0AEH6
elaB
101 aa
ElaB protein
n.s.
○○○○○ 0.03
0.0311359847835952
Escherichia coli CFT073
c5181
AAN83603.1
A0A0H2VDG4
papE_2
179 aa
PapE protein
n.s.
○○○○○ 0.03
0.0314816824914747
Escherichia coli CFT073
c2509
AAN80964.1
A0A0H2V4C0
251 aa
Insertion sequence ATP-binding protein
n.s.
○○○○○ 0.03
0.0318632280976389
First
Previous
16
Next
Last
Retrieved entries 1,501–1,600 out of 3,048 total in 10.2 ms
(
Link to these results
)