BacFITBase
Search
BLAST
Browse
(current)
Download
Tutorial
About
Search
Browse BacFITBase
Pathogen
Any pathogen
Acinetobacter baumannii ATCC 17978
Campylobacter jejuni subsp. jejuni 81-176
Escherichia coli CFT073
Escherichia coli M12
Escherichia coli O157:H7 str. EDL933
Haemophilus influenzae Rd KW20
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
Mycobacterium avium subsp. paratuberculosis K10
Porphyromonas gingivalis ATCC 33277
Salmonella enterica Serovar Typhimurium SL1344
Salmonella enterica Serovar Typhimurium ST4 74
Serratia marcescens Strain UMH9
Streptococcus pyogenes M1 5448
Vibrio cholerae O1 biovar El Tor str. N16961
Vibrio parahaemolyticus RIMD 2210633
Sorted by significance (p<0.05) and Fitness z-Scores (highest impact first):
Download Table
Pathogen
Locus
Protein
UniProt
Gene
Length
Product
p-Value
Fitness z-Score
Precise fitness z-Score
Escherichia coli CFT073
c0240
AAN78732.1
P63355
metN
343 aa
D-methionine transport ATP-binding protein metN
n.s.
○○○○○ 0.77
0.769927419868954
Escherichia coli CFT073
c4124
AAN82562.1
P0ADW9
yheV
66 aa
Conserved hypothetical protein
n.s.
○○○○○ 0.77
0.770562774585496
Escherichia coli CFT073
c3123
AAN81573.1
A0A0H2VC38
yfiL
127 aa
Hypothetical protein yfiL
n.s.
○○○○○ 0.77
0.771217335496155
Escherichia coli CFT073
c3467
AAN81915.1
Q8FE75
idi
182 aa
Isopentenyl-diphosphate delta-isomerase
n.s.
○○○○○ 0.77
0.773588242549152
Escherichia coli CFT073
c0283
AAN78771.1
A0A0H2V4D0
168 aa
Hypothetical protein
n.s.
○○○○○ 0.77
0.773866325249088
Escherichia coli CFT073
c3212
AAN81664.1
A0A0H2V9V6
ygaE
226 aa
Hypothetical transcriptional regulator ygaE
n.s.
○○○○○ 0.77
0.774578468852251
Escherichia coli CFT073
c4404
AAN82840.1
A0A0H2VEQ7
sgbH
220 aa
Probable hexulose-6-phosphate synthase
n.s.
○○○○○ 0.78
0.776200597887741
Escherichia coli CFT073
c3756
AAN82200.1
A0A0H2VB67
ygiK
448 aa
c4-dicarboxylate permease
n.s.
○○○○○ 0.78
0.777291353180763
Escherichia coli CFT073
c3657
AAN82105.1
A0A0H2VAQ2
130 aa
Unknown in ISEc8
n.s.
○○○○○ 0.78
0.778695390980437
Escherichia coli CFT073
c4529
AAN82963.1
A0A0H2VEZ5
165 aa
Hypothetical protein
n.s.
○○○○○ 0.78
0.779155957577624
Escherichia coli CFT073
c4761
AAN83194.1
A0A0H2VCY3
301 aa
Putative conserved protein
n.s.
○○○○○ 0.78
0.779588691822694
Escherichia coli CFT073
c0615
AAN79092.1
P0ADA2
tesA
218 aa
Acyl-CoA thioesterase I precursor
n.s.
○○○○○ 0.78
0.781077377977404
Escherichia coli CFT073
c5071
AAN83497.1
A0A0H2VES4
nrfF
127 aa
Formate-dependent nitrite reductase complex nrfF subunit precursor
n.s.
○○○○○ 0.78
0.781239627879633
Escherichia coli CFT073
c3439
AAN81884.1
A0A0H2VBT1
kduD
253 aa
2-deoxy-D-gluconate 3-dehydrogenase
n.s.
○○○○○ 0.78
0.781991884799947
Escherichia coli CFT073
c3828
AAN82273.1
Q8FDF5
patA
496 aa
Probable ornithine aminotransferase
n.s.
○○○○○ 0.79
0.785860149621521
Escherichia coli CFT073
c3618
AAN82066.1
A0A0H2VC54
232 aa
Hypothetical protein
n.s.
○○○○○ 0.79
0.786956219645789
Escherichia coli CFT073
c4340
AAN82776.1
P0A831
dctA
428 aa
Aerobic C4-dicarboxylate transport protein
n.s.
○○○○○ 0.79
0.787281910229647
Escherichia coli CFT073
c4765
AAN83198.1
A0A0H2VCM2
491 aa
Hypothetical protein yahG
n.s.
○○○○○ 0.79
0.788045761296822
Escherichia coli CFT073
c4506
AAN82942.1
A0A0H2VCF2
insI
383 aa
Transposase insI for insertion sequence element IS30B/C/D
n.s.
○○○○○ 0.79
0.788640270054434
Escherichia coli CFT073
c0024
AAN78524.1
Q8FLC1
nhaA
388 aa
Na(+)/H(+) antiporter 1
n.s.
○○○○○ 0.79
0.790363396537389
Escherichia coli CFT073
c0284
AAN78772.1
A0A0H2V4D6
356 aa
Conserved hypothetical protein
n.s.
○○○○○ 0.79
0.791697562232954
Escherichia coli CFT073
c4502
AAN82938.1
A0A0H2VEX0
489 aa
Putative antiporter
n.s.
○○○○○ 0.79
0.792710156258245
Escherichia coli CFT073
c5091
AAN83516.1
A0A0H2VET7
yjcU
233 aa
D-allulose-6-phosphate 3-epimerase
n.s.
○○○○○ 0.79
0.792797149606713
Escherichia coli CFT073
c4224
AAN82662.1
A0A0H2VBX2
gntU
446 aa
Low-affinity gluconate transport permease protein, interrupted
n.s.
○○○○○ 0.79
0.792900761291791
Escherichia coli CFT073
c4480
AAN82916.1
A0A0H2VC02
yicH
577 aa
Hypothetical protein yicH
n.s.
○○○○○ 0.8
0.795234858820497
Escherichia coli CFT073
c5031
AAN83457.1
A0A0H2VDE6
tyrB
411 aa
Aromatic-amino-acid aminotransferase
n.s.
○○○○○ 0.8
0.796293611980583
Escherichia coli CFT073
c0951
AAN79424.1
A0A0H2V7Q0
430 aa
Hypothetical protein
n.s.
○○○○○ 0.8
0.797044453754665
Escherichia coli CFT073
c0952
AAN79425.1
A0A0H2V5L9
352 aa
Major capsid protein
n.s.
○○○○○ 0.8
0.797044453754665
Escherichia coli CFT073
c0537
AAN79015.1
P0A8E8
yajQ
219 aa
Protein yajQ
n.s.
○○○○○ 0.8
0.798288274017494
Escherichia coli CFT073
c4895
AAN83323.1
A0A0H2VCX5
541 aa
Hypothetical protein
n.s.
○○○○○ 0.8
0.798860271095686
Escherichia coli CFT073
c5462
AAN83882.1
A0A0H2VDY4
yjjW
287 aa
Hypothetical protein yjjW
n.s.
○○○○○ 0.8
0.800406276589453
Escherichia coli CFT073
c4953
AAN83381.1
Q8FB75
nudC
257 aa
NADH pyrophosphatase
n.s.
○○○○○ 0.8
0.800406276589459
Escherichia coli CFT073
c4165
AAN82603.1
A0A0H2VE49
yrfD
268 aa
Hypothetical protein yrfD
n.s.
○○○○○ 0.8
0.800406276589461
Escherichia coli CFT073
c5155
AAN83577.1
A0A0H2VDE1
161 aa
Hypothetical protein yfjX
n.s.
○○○○○ 0.8
0.802690166201605
Escherichia coli CFT073
c5154
AAN83576.1
A0A0H2VFZ7
148 aa
Hypothetical protein
n.s.
○○○○○ 0.8
0.802690166201605
Escherichia coli CFT073
c5085
AAN83510.1
Q8CVH8
mdtP
488 aa
Hypothetical outer-membrane lipoprotein yjcP precursor
n.s.
○○○○○ 0.8
0.804152858015763
Escherichia coli CFT073
c4324
AAN82760.1
Q8CVL1
mdtE
385 aa
Hypothetical lipoprotein yhiU precursor
n.s.
○○○○○ 0.8
0.804706769949778
Escherichia coli CFT073
c4949
AAN83377.1
A0A0H2VD00
thiF
256 aa
Adenylyltransferase thiF
n.s.
○○○○○ 0.8
0.804948807925683
Escherichia coli CFT073
c0082
AAN78578.1
Q8FL82
thiQ
239 aa
Thiamine transport ATP-binding protein thiQ
n.s.
○○○○○ 0.81
0.805408843278323
Escherichia coli CFT073
c0152
AAN78646.1
A0A0H2V447
yacK
529 aa
Blue copper oxidase cueO precursor
n.s.
○○○○○ 0.81
0.805717462533215
Escherichia coli CFT073
c5156
AAN83578.1
A0A0H2VEY5
272 aa
Hypothetical protein yafZ
n.s.
○○○○○ 0.81
0.805746424766458
Escherichia coli CFT073
c0276
AAN78764.1
A0A0H2V4X8
74 aa
Hypothetical protein
n.s.
○○○○○ 0.81
0.80581275902182
Escherichia coli CFT073
c4683
AAN83115.1
A0A0H2VF86
yieP
230 aa
Hypothetical transcriptional regulator yieP
n.s.
○○○○○ 0.81
0.80625906996473
Escherichia coli CFT073
c3681
AAN82129.1
A0A0H2VAY5
131 aa
Hypothetical protein
n.s.
○○○○○ 0.81
0.806287629496125
Escherichia coli CFT073
c3989
AAN82429.1
A0A0H2VBJ8
degQ
469 aa
Protease degQ precursor
n.s.
○○○○○ 0.81
0.807616275356122
Escherichia coli CFT073
c4904
AAN83332.1
P0A9S6
gldA
380 aa
Glycerol dehydrogenase
n.s.
○○○○○ 0.81
0.80762643793509
Escherichia coli CFT073
c0826
AAN79299.1
A0A0H2V612
pnuC
239 aa
Protein pnuC
n.s.
○○○○○ 0.81
0.808247953088278
Escherichia coli CFT073
c3105
AAN81554.1
Q8FF08
ung
229 aa
Uracil-DNA glycosylase
n.s.
○○○○○ 0.81
0.808313246663512
Escherichia coli CFT073
c4495
AAN82931.1
A0A0H2VC19
452 aa
Hexuronate transporter
n.s.
○○○○○ 0.81
0.810776061934744
Escherichia coli CFT073
c3745
AAN82189.1
A0A0H2VB27
yqhD
387 aa
Hypothetical oxidoreductase yqhD
n.s.
○○○○○ 0.81
0.810893110158455
Escherichia coli CFT073
c3843
AAN82288.1
A0A0H2VDR4
ygjP
179 aa
Hypothetical protein ygjP
n.s.
○○○○○ 0.81
0.813527712078332
Escherichia coli CFT073
c4485
AAN82921.1
A0A0H2VC09
363 aa
Putative PTS enzyme-ii fructose
n.s.
○○○○○ 0.81
0.814562786600334
Escherichia coli CFT073
c4750
AAN83183.1
A0A0H2VCX2
metR
317 aa
Transcriptional activator protein metR
n.s.
○○○○○ 0.82
0.815410742870045
Escherichia coli CFT073
c0023
AAN78523.1
A0A0H2V3Z1
419 aa
Hypothetical protein
n.s.
○○○○○ 0.82
0.815490055400404
Escherichia coli CFT073
c4696
AAN83128.1
Q8FBR2
ilvC
541 aa
Ketol-acid reductoisomerase
n.s.
○○○○○ 0.82
0.816524195151899
Escherichia coli CFT073
c1464
AAN79933.1
A0A0H2V6J2
232 aa
Putative tail fiber component K of prophage
n.s.
○○○○○ 0.82
0.816973491317518
Escherichia coli CFT073
c3606
AAN82054.1
A0A0H2VD24
106 aa
Hypothetical protein
n.s.
○○○○○ 0.82
0.817448732032918
Escherichia coli CFT073
c5453
AAN83873.1
P0A945
rimI
148 aa
Ribosomal-protein-alanine acetyltransferase
n.s.
○○○○○ 0.82
0.818600003436658
Escherichia coli CFT073
c0088
AAN78584.1
A0A0H2V420
61 aa
Hypothetical protein
n.s.
○○○○○ 0.82
0.821294311199652
Escherichia coli CFT073
c3802
AAN82247.1
A0A0H2VB32
ygiF
442 aa
Hypothetical protein ygiF
n.s.
○○○○○ 0.82
0.821606324918474
Escherichia coli CFT073
c5033
AAN83459.1
A0A0H2VD55
66 aa
Hypothetical protein
n.s.
○○○○○ 0.82
0.82190426777885
Escherichia coli CFT073
c4173
AAN82611.1
A0A0H2VBJ5
yhgE
574 aa
Hypothetical protein yhgE
n.s.
○○○○○ 0.82
0.822140877450003
Escherichia coli CFT073
c4521
AAN82955.1
A0A0H2VDU5
102 aa
Conserved hypothetical protein
n.s.
○○○○○ 0.82
0.822171214440192
Escherichia coli CFT073
c0312
AAN78800.1
A0A0H2V512
80 aa
Hypothetical protein
n.s.
○○○○○ 0.82
0.822269015223119
Escherichia coli CFT073
c0544
AAN79022.1
A0A0H2V4V2
ampG
491 aa
AmpG protein
n.s.
○○○○○ 0.82
0.823141967130514
Escherichia coli CFT073
c4916
AAN83344.1
Q8FB97
argE
396 aa
Acetylornithine deacetylase
n.s.
○○○○○ 0.82
0.823176328956613
Escherichia coli CFT073
c3663
AAN82111.1
A0A0H2VC92
126 aa
Hypothetical protein
n.s.
○○○○○ 0.82
0.823393466049714
Escherichia coli CFT073
c5405
AAN83827.1
Q8FAA2
iraD
130 aa
Hypothetical protein yjiD
n.s.
○○○○○ 0.82
0.824553173989954
Escherichia coli CFT073
c4028
AAN82468.1
A0A0H2VBD2
yhdJ
296 aa
Hypothetical adenine-specific methylase yhdJ
n.s.
○○○○○ 0.82
0.824613638962433
Escherichia coli CFT073
c4705
AAN83138.1
A0A0H2VCU6
wzzE
349 aa
Lipopolysaccharide biosynthesis protein wzzE
n.s.
○○○○○ 0.83
0.825231979837521
Escherichia coli CFT073
c3696
AAN82144.1
A0A0H2VCB7
135 aa
Putative glycerol-3-phosphate cytidyltransferase
n.s.
○○○○○ 0.83
0.825735896347192
Escherichia coli CFT073
c5472
AAN83892.1
A0A0H2VDY8
smp
214 aa
Protein smp precursor
n.s.
○○○○○ 0.83
0.82580146689436
Escherichia coli CFT073
c5457
AAN83877.1
P0AFH9
osmY
227 aa
Osmotically inducible protein Y precursor
n.s.
○○○○○ 0.83
0.826512331515466
Escherichia coli CFT073
c0556
AAN79034.1
P0ACF5
hupB
90 aa
DNA-binding protein HU-beta
n.s.
○○○○○ 0.83
0.827145418114268
Escherichia coli CFT073
c4851
AAN83279.1
Q8FBE1
rhaD
305 aa
Rhamnulose-1-phosphate aldolase
n.s.
○○○○○ 0.83
0.827857900222999
Escherichia coli CFT073
c5118
AAN83542.1
A0A0H2VDK2
basR
222 aa
Transcriptional Regulatory protein basR/pmrA
n.s.
○○○○○ 0.83
0.829983134650354
Escherichia coli CFT073
c0972
AAN79445.1
A0A0H2V5N6
171 aa
Putative tail fiber component of prophage
n.s.
○○○○○ 0.83
0.830964817641017
Escherichia coli CFT073
c0973
AAN79446.1
A0A0H2V6F6
194 aa
Hypothetical protein
n.s.
○○○○○ 0.83
0.830964817641017
Escherichia coli CFT073
c4367
AAN82803.1
A0A0H2VEK7
tag
242 aa
DNA-3-methyladenine glycosylase I
n.s.
○○○○○ 0.83
0.831397930092379
Escherichia coli CFT073
c1780
AAN80246.1
A0A0H2V7B7
ycjM
568 aa
Putative sucrose phosphorylase
n.s.
○○○○○ 0.83
0.833120226858358
Escherichia coli CFT073
c4170
AAN82608.1
A0A0H2VE54
yrfG
237 aa
Hypothetical protein yrfG
n.s.
○○○○○ 0.83
0.834004137068921
Escherichia coli CFT073
c0398
AAN78879.1
A0A0H2V584
60 aa
Hypothetical protein
n.s.
○○○○○ 0.84
0.837982819389017
Escherichia coli CFT073
c5487
AAN83907.1
A0A0H2VFJ3
creD
450 aa
Inner membrane protein creD
n.s.
○○○○○ 0.84
0.838220589789
Escherichia coli CFT073
c3739
AAN82183.1
A0A0H2VDG0
yghA
295 aa
Hypothetical oxidoreductase yghA
n.s.
○○○○○ 0.84
0.838664409262651
Escherichia coli CFT073
c4459
AAN82895.1
Q8FC87
mutM
269 aa
Formamidopyrimidine-DNA glycosylase
n.s.
○○○○○ 0.84
0.83937118286617
Escherichia coli CFT073
c0045
AAN78543.1
Q8FLA6
caiD
297 aa
Carnitinyl-CoA dehydratase
n.s.
○○○○○ 0.84
0.841126451753549
Escherichia coli CFT073
c5346
AAN83768.1
A0A0H2VE37
argR
184 aa
Hypothetical protein
n.s.
○○○○○ 0.84
0.841657382938621
Escherichia coli CFT073
c3502
AAN81950.1
A0A0H2VAJ4
yggB
286 aa
Hypothetical protein yggB
n.s.
○○○○○ 0.84
0.842648788341175
Escherichia coli CFT073
c0624
AAN79101.1
A0A0H2V5L8
ybbQ
292 aa
2-hydroxy-3-oxopropionate reductase
n.s.
○○○○○ 0.84
0.843007134267386
Escherichia coli CFT073
c0273
AAN78761.1
A0A0H2V4C5
163 aa
Putative radC-like protein yeeS
n.s.
○○○○○ 0.85
0.845869178738468
Escherichia coli CFT073
c0274
AAN78762.1
A0A0H2V677
319 aa
Hypothetical protein
n.s.
○○○○○ 0.85
0.845869178738468
Escherichia coli CFT073
c5317
AAN83738.1
Q8FAG4
msrA
234 aa
Peptide methionine sulfoxide reductase msrA
n.s.
○○○○○ 0.85
0.846568083515613
Escherichia coli CFT073
c3200
AAN81652.1
A0A0H2VC90
228 aa
Hypothetical protein
n.s.
○○○○○ 0.85
0.846629538971747
Escherichia coli CFT073
c2731
AAN81185.1
A0A0H2V947
ccmH
350 aa
Cytochrome c-type biogenesis protein ccmH precursor
n.s.
○○○○○ 0.85
0.846829933990617
Escherichia coli CFT073
c4700
AAN83132.1
P0A8J9
rhlB
421 aa
Putative ATP-dependent RNA helicase rhlB
n.s.
○○○○○ 0.85
0.848436009375452
Escherichia coli CFT073
c4142
AAN82580.1
A0A0H2VE35
nirD
108 aa
Nitrite reductase [NAD(P)H] small subunit
n.s.
○○○○○ 0.85
0.848626256421621
Escherichia coli CFT073
c5164
AAN83586.1
A0A0H2VDM9
291 aa
Hypothetical protein
n.s.
○○○○○ 0.85
0.848748410340666
Escherichia coli CFT073
c5165
AAN83587.1
A0A0H2VG06
60 aa
Hypothetical protein
n.s.
○○○○○ 0.85
0.848748410340666
Escherichia coli CFT073
c3584
AAN82032.1
A0A0H2VD03
papF
176 aa
PapF protein
n.s.
○○○○○ 0.85
0.848748410340672
Escherichia coli CFT073
c4518
AAN82952.1
A0A0H2VCG1
145 aa
Conserved hypothetical protein
n.s.
○○○○○ 0.85
0.849461502719628
First
Previous
26
Next
Last
Retrieved entries 2,501–2,600 out of 3,048 total in 9.8 ms
(
Link to these results
)