Bacterial taxon 909946
Locus STM474_0412
Protein WP_001526312.1
exonuclease subunit SbcC
Salmonella enterica Serovar Typhimurium ST4 74
Length 1,046 aa, Gene sbcC, UniProt E8XKH9
>WP_001526312.1|Salmonella enterica Serovar Typhimurium ST4 74|exonuclease subunit SbcC
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLNTVSQSQNDLMTRDTAECLAEVEFEVKGEAWRAFWSQNRARNQPDGNLQAPRVELARCSDGKIFADKVKDKLEMIATLTGLDYGRFTRSMLLSQGQFAAFLNAKAKERAELLEELTGTEIYGQISAQVFEKHKSARLELEKLQAQASGVALLADEQLQQLEASLQALTDEEKRLLADQQGQQQHLHWLTRKNELHTELHARQQALYAAQEAREKAQPQLAALTLAQPARQLRPHWERIQEQTRAVERVRQHSDEVNARLQSAYRLRQRIRACAHRQFTQLNATGQRLKTWLAEHDGIRVWRSELAGWRALLTQQSHDRAQLSQWQQQLLSDTRQRDALPPLTLDLTPQALAEARALHTRQRPLRHRLAALQGQILPKQKRQAQLQAAIARHHQEQAQYTQRLADKRLSYKTKAQELADVRTICEQEARIKDLESQRAHLQSGQPCPLCGSTTHPAIAAYQALELSANQTRRDALEKEVKTLAEEGAALRGQLDALTQQLQRDESEAQSLLQEEQALTEEWQTLCATLGVQLQPQEDLAGWLTAAEEHEQQLDQLSQRHALQTQIAAHTEQVARFTAQIAQRQASLTADLAQYTLSLPAPEDEASWLNERADEAKIWQQRQTEFADLQMQIDRLAPLLETLPQTDTADSDDDVPLDNWRQAHDECVSLQSQLQTLQEQTTQEQQRAAEAIAHFDAALKNSPFDSQATFLAALLDEETVTRLEKQQQTLESQLQQAKALSAQSAQALADHQQQPPAGLDPTCTAEQLAQRLTQLAQQLRENTTRQGEIRQQIKQDADNRQRQRALMTEMKQASQQVEDWGYLNALIGSKEGDKFRKFAQGLTLDNLVWLANHQLTRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDAALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLDKAFAVE
| Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 448,509 | -1.01 | 0.068 | ●○○○○ -0.35 | -0.347540290809206 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 447,024 | -0.73 | 0.83 | ●○○○○ -0.2 | -0.203975143259941 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 447,024 | -0.71 | 0.57 | ●○○○○ -0.19 | -0.189131453184074 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 445,868 | -0.49 | 0.53 | ●○○○○ -0.08 | -0.0786586122319664 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 446,419 | -0.31 | 0.83 | ○○○○○ 0.02 | 0.0154943159190113 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 448,509 | 0.32 | 0.84 | ○○○○○ 0.34 | 0.341432480908766 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 447,024 | 0.46 | 0.57 | ○○○○○ 0.41 | 0.414174916808046 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 447,626 | 0.47 | 0.91 | ○○○○○ 0.42 | 0.422586213225223 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 448,509 | 0.5 | 0.91 | ○○○○○ 0.44 | 0.435858080447894 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 445,868 | 0.55 | 0.67 | ○○○○○ 0.46 | 0.464903163841913 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 447,870 | 0.68 | 0.57 | ○○○○○ 0.53 | 0.530304903341098 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 445,868 | 0.68 | 0.86 | ○○○○○ 0.53 | 0.530678216883823 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 446,419 | 0.75 | 0.83 | ○○○○○ 0.57 | 0.565596057541811 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 447,626 | 0.95 | 0.75 | ○○○○○ 0.67 | 0.668815868650744 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 447,870 | 0.96 | 0.075 | ○○○○○ 0.67 | 0.674378599699266 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 447,870 | 1.05 | 0.7 | ○○○○○ 0.72 | 0.721679153010966 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 446,419 | 1.31 | 0.082 | ○○○○○ 0.86 | 0.858160574586968 | 23637626 |
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