Bacterial taxon 909946
Locus STM474_2616
Protein WP_000375791.1
outer membrane protein RatA
Salmonella enterica Serovar Typhimurium ST4 74
Length 1,865 aa, Gene ratA, UniProt E8XGK3
>WP_000375791.1|Salmonella enterica Serovar Typhimurium ST4 74|outer membrane protein RatA
MDRNRQVNKVVHFLLTLLIMFAVSIAPAQALLKGGTWQELNSVTGAVNGTAPLADGAIIPLYQGSTLLDPSKTHDIEFSAMPRDFSADATSTSMRAVNSTDTEGDLFSDPPTIAWENRQPPAMGLVWADAATPDTPLSPQPVPNLTFCAQNLAGRQLVAWAQVEDETNVPALWLFTRTGVPNYATIPLLSPKVALNIKPATDTPVTVSGDHVDSAFEASKVKVGESITLTISTKACDGTPEGNAPFVIRRKDAENRQGVVNNANPVRVGDTELTTTQTEYRGVTDANGNATVVVTQKEGPGVKTPLVVSSVNFPALTAETAVIFTTITSPDSDKASMYGHMIESATATLNGITYTFTRPKLAAEASGADKSVVDTNETWALFTWSGADNHCDILPDAEQLVQMRHEHSTLETWTGWPVAGDAEYWSSTKNQLSGYHAAVHMNSASVVRAADSDTLLVSCVDKAQPAAHPQITLSPQGPYKAQVGESIDLTMTVVDRDTQKPLPYRYMELFIDPAKNRKGEHQDAWDNLRVTVDSEGMSASSPEHYTGVTDVNGQAHLTLKHNSGLGVETPIRIVMPDDEGGNVELSFSVIFTVVTSPDVDGANMWGHMRGVVDAGNLYKRPLLAVEASHKDGQFSENNEEWATFNSVASATAQCGVGQVPDQSSLAHLYSEHAGGQMESEHGWPTEDYFIAADSDASGTVHVNLENGDSGKFTDTPNYLTCSANEMVAVLDVYFNDDPVIKNADAKVGEQVKMNIHSRNALNGMAIGNTDFTITMANGRRRDGLTTGFTDTSNGEMQFDDVGYVAGQVYHGITDANGDATIILTQKKGVGLLTPLNIAPVDSLISTPVSRSVKFTVATSPDTPAAKMWGHMADTITVGDWTFERPKLAGEVSNPLRTQDESNETWARVAHSDAVGNPDAGGCAANRLPRIDQLEALYNANSGGKIHSIQGWPTYLNYWSSTYQSATTWKLIALTNGSEFANSNVSIYASCLASDNPVAASITIEPVNPSQWYDGSDVHAVKVKKGETMQLKVTVKDVSGNPIPEAPFVLTRGDGYDRRGEKYTAQDGDDLQGIVTPVVIDGESLAWTTTKMGSQTGTDGTRIISVTRPDTHGTRTAINATLYENAAVSASIDTIFTVVTSPDVSVARMWGHMAPSLTAADGAVYQRPLLYAELSSTDNTASKQETNETWAVFHGPASEGANPARCAAGYYPAVEALDSLYSKYPSRTINTAQGWPVYYSYWSGSNSTSFSSGAKLDFYYAVDLADGSRRSENSATSTAWQYQICATTPLPQATQITLTSPQAMDDAIQAVKAKNSESIPLLITTTDAMGNPVPYATFSLKRDAGKARNPDYNKFVATNGTNMTVTPLTGAQQQFYYATSVLTGATGADGTLALTLAEPGGIGLKNQLTANLNDTPTATSSLPVVFTVLTSPDSDKANMYGHMPETFTASNGAEFKRPLVAGEPSSEAHTDTYFETNENWIMVNSFNTGNYGGCPMNQMAAIDDFTALYNDHPSGKVATDIGLPVGKRWWAGDSLLKGSTLYWQYKDLKTGKNYSMSENPGNYYLQLCLTTSRSGLNIALSSDAWNADKSAAVAKKGETIPMTVTVTNDAGQPQAGVAVLLTRDYAYSRGAVDKQYIEPGVIGEPVPFTTSPANMMLAPVAPAGTAVAFNNQNGLSTKWSGFTGDDGKLRFTLTQDKSLGLKTSVTAAFANQFDEAASVDAIFTVQTSPDTPYASYWGHMPDTVQVNGVTLRRPYLKAELSAAPRDTWPFNNEFWGTNYYYQSEHVETSLTHLCGSQENIASLDDLKALQSVIGTLQWPTTSSWDYVSQDEGQSNKYYCSFNETTGQTTCTREKATTSGLGSCRVP
| Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,641,425 | -1.43 | 0.029 | ●○○○○ -0.57 | -0.56512807748652 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,642,344 | 1.65 | 0.0056 | ○○○○○ 1.04 | 1.03607086355697 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,642,006 | 2.15 | 0.004 | ○○○○○ 1.29 | 1.29217049307704 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,642,181 | -0.98 | 0.13 | ●○○○○ -0.33 | -0.333006206823176 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,642,006 | -0.19 | 0.97 | ○○○○○ 0.08 | 0.0773224493191576 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,641,425 | -0.17 | 0.96 | ○○○○○ 0.09 | 0.089355889066589 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,641,425 | -0.16 | 0.91 | ○○○○○ 0.09 | 0.0916117662550165 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,640,665 | -0.15 | 0.97 | ○○○○○ 0.1 | 0.0999683705228882 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,642,181 | 0.18 | 0.99 | ○○○○○ 0.27 | 0.269290599249816 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,640,665 | 0.48 | 0.71 | ○○○○○ 0.42 | 0.424824246759789 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,640,665 | 0.7 | 0.41 | ○○○○○ 0.54 | 0.540564779448544 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,642,344 | 1 | 0.6 | ○○○○○ 0.7 | 0.697942202468287 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,642,006 | 1.08 | 0.37 | ○○○○○ 0.74 | 0.738056142135292 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,642,344 | 1.11 | 0.67 | ○○○○○ 0.76 | 0.755586774893961 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,642,181 | 1.19 | 0.34 | ○○○○○ 0.8 | 0.797282182127187 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,641,562 | 1.29 | 0.61 | ○○○○○ 0.85 | 0.848589865987511 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,641,562 | 2.18 | 0.094 | ○○○○○ 1.31 | 1.3113482368601 | 23637626 |
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