Bacterial taxon 909946
Locus STM474_3689
Protein WP_001232871.1
sigma 54-dependent transcriptional regulator
Salmonella enterica Serovar Typhimurium ST4 74
Length 527 aa, Gene rtcR, UniProt E8XEM5
>WP_001232871.1|Salmonella enterica Serovar Typhimurium ST4 74|sigma 54-dependent transcriptional regulator
MRKTVAFGFVGTVLDYAGRGSQRWEKWRPTLCLCQQETLVVHRLELLYDARSRSLFEGLKKDIASVSPETEVVGVEIAIRNPWDFEEVYACLHDFARSHTFHPEDEDYLIHITTGTHVAQICWFLLAEARYLPARLAQTSPPRKKDKPHSTGDVTIIDLDLSRYNDIATRFAQEREETLNFLKSGIATRNPCFNRMIEQIERVAIRSRSPILLNGPTGAGKSFLARRIYELKLARHQFSGPFVEVNCATLRGDTAMSALFGHVKGAFTGAREERAGLLRSADGGMLFLDEVGELGADEQAMLLKAIEEKRFYPFGSDQQVSSDFQLIAGTVRDLRQRVAEGTFREDLYARINLWTFELPGLRQRQEDIEPNLDYELERHAALTGDSVRFNTEARRAWLSFATSPQAAWRGNFRELSASVTRMATLADNGRITVETVDDEIARLRYSWNDHRPSALDGLPGIDATALDLFDRMQLENVVAVCRQAKTLSDAGRQLFNVSRQGKATVNDADRLRKYLARFGLTWDVLQN
| Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,706,438 | -1.12 | 0.045 | ●○○○○ -0.4 | -0.403000779748882 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,707,015 | 1.49 | 0.046 | ○○○○○ 0.95 | 0.952495165778938 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,706,226 | -0.51 | 0.86 | ●○○○○ -0.09 | -0.0878541663180085 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,706,438 | -0.45 | 0.72 | ●○○○○ -0.06 | -0.0554140831794867 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,707,243 | -0.11 | 0.9 | ○○○○○ 0.12 | 0.122280932700692 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,706,487 | -0.07 | 0.97 | ○○○○○ 0.14 | 0.139294823422084 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,706,487 | -0.05 | 0.95 | ○○○○○ 0.15 | 0.150877006718733 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,707,015 | 0.37 | 0.97 | ○○○○○ 0.37 | 0.36811469945319 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,707,243 | 0.68 | 0.85 | ○○○○○ 0.53 | 0.529154343397576 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,706,226 | 0.93 | 0.26 | ○○○○○ 0.66 | 0.660015651206175 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,706,226 | 1.14 | 0.52 | ○○○○○ 0.77 | 0.767091875267733 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,706,487 | 1.22 | 0.61 | ○○○○○ 0.81 | 0.809062311577949 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,706,438 | 1.28 | 0.57 | ○○○○○ 0.84 | 0.841429039953986 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,707,243 | 1.32 | 0.49 | ○○○○○ 0.86 | 0.861670078034616 | 23637626 |
Retrieved 14 of 14 entries in 1.4 ms
(Link to these results)