Bacterial taxon 909946
Locus STM474_0825
Protein WP_000482001.1
SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP
Salmonella enterica Serovar Typhimurium ST4 74
Length 765 aa, Gene slrP, UniProt E8XBR3
>WP_000482001.1|Salmonella enterica Serovar Typhimurium ST4 74|SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP
MFNITNIQSTARHQSISNEASTEVPLKEEIWNKISAFFSSEHQVEAQNCIAYLCHPPETASPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTTIPAYIPEQITTLILDNNELKSLPENLQGNIKTLYANSNQLTSIPATLPDTIQEMELSINRITELPERLPSALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGENALTSLPASLPPELQVLDVSKNQITVLPETLPPTITTLDVSRNALTNLPENLPAALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFSERTIQNMQRLMSSVDYQGPRVLFAMGDFSIVRVTRPLHQAVQGWLTSLEEEDVNQWRAFEAEANAAAFSGFLDYLGDTQNTRHPDFKEQVSAWLMRLAEDSALRETVFIIAMNATISCEDRVTLAYHQMQEATLVHDAERGAFDSHLAELIMAGREIFRLEQIESLAREKVKRLFFIDEVEVFLGFQNQLRESLSLTTMTRDMRFYNVSGITESDLDEAEIRIKMAENRDFHKWFALWGPWHKVLERIAPEEWREMMAKRDECIETDEYQSRVNAELEDLRIADDSDAERTTEVQMDAERAIGIKIMEEINQTLFTEIMENILLKKEVSSLMSAYWR
| Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 867,412 | -1.46 | 0.17 | ●○○○○ -0.58 | -0.582097460339627 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 867,412 | -0.24 | 0.95 | ○○○○○ 0.05 | 0.0499232711007464 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 866,949 | 0.11 | 0.94 | ○○○○○ 0.23 | 0.2316895575716 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 867,899 | 0.51 | 0.52 | ○○○○○ 0.44 | 0.4414235269931 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 867,899 | 0.7 | 0.94 | ○○○○○ 0.54 | 0.540719389308386 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 866,949 | 0.72 | 0.91 | ○○○○○ 0.55 | 0.549483631744875 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 867,079 | 1.08 | 0.73 | ○○○○○ 0.74 | 0.739102627253924 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 867,079 | 2.46 | 0.79 | ○○○○○ 1.45 | 1.45239534728208 | 23637626 |
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