Bacterial taxon 909946
Locus STM474_1607
Protein WP_000960833.1
virulence factor SrfB
Salmonella enterica Serovar Typhimurium ST4 74
Length 993 aa, Gene srfB, UniProt E8XJ42
>WP_000960833.1|Salmonella enterica Serovar Typhimurium ST4 74|virulence factor SrfB
MLVNLCDYKQSVTLIANSGVQFLDFGLTPQESAHYGRFVRKTANGPLLRLDFDLTSGRYTLPGRAGGQPEVVKPESTQTLHYSLDVLDGIWLPLPFLRFNPPRTFIDGPDNWARIQVRKLSEPDSAGNTHRITLAFDSQLAKNMPAALAPCENDLLNGTRFALAWRDEEVADFLDQTWIDGWLRESFLQYASQVENRSEQAIQQALRSFEYQAHWLNLLTLLGEQLTVPEVKFVTHTLSTPAIPVDLILDVGNTHTCGVLIEDHGDANDGLRQTAELQVRSLSEPQYLNDPLFTSRVEFSEARFGKQHFSVESGRDDAFVWPSIVRVGDEARALAMQRVGTEGSSGISSPRRYLWDETPALQDWRFSQIHGKTQREPLATAFPLMNLMNDDGQPLFRLPYEERLPVFSPQYSRSTLMTHMLCEILAQALGQINSVATRLRLGFPASPRQLRTLILTLPSAMPKQEREIFRQRMFEALALVWKAMGWHPQDEDFTTPKQREKSVVPVPEIQMEWDEASCGQLVWLYNEAISHYAGRTESFFNALARPDRQPEPGVVPGRALRVASIDIGGGTTDMAIVHYQLDDGVGANVKITPHLLFREGFKVAGDDLLLDIIQRCVLPSLQTALQRAGVTDAAALLATLFGDSGRIDTQAILRQQTALQLFMPLGHAVLSAWEQSDINDPFAGLHATFGDLLIRRPTSNVMNYIQQAIDHALPSGSPTFDIFNVPLQIQFSQLQESLLAGQFTLTTPLHAVCEAISHYHCDILLVTGRPTCLPGVQALIRHLQPVPVNRIVWMDKYQVHEWYPFSQQGRIGNPKSTAAVGAMLCSLALDLRLPRFNFKAADIGAYSTVRYLGVLDNTVNTLRDENIWYHEIDLDKPGATLDARLHFPLRGNVTLGFRQLANSRWPATPLYCLSINSAELAKTIAGDGVLNVRLKLRGSSKDSAPESFILSDAWLQDGTPVAADALTLKLNTLADRRHSGSHYWIDSGSVYLK
| Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 1,638,712 | -2.98 | 0.088 | ●●○○○ -1.37 | -1.37209818034599 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 1,638,792 | -1.9 | 0.057 | ●○○○○ -0.81 | -0.808117591259817 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 1,638,792 | -1.28 | 0.42 | ●○○○○ -0.49 | -0.487597792499585 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 1,639,438 | -0.89 | 0.51 | ●○○○○ -0.28 | -0.283502705918187 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 1,638,712 | -0.22 | 0.95 | ○○○○○ 0.06 | 0.06405862004976 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 1,639,180 | 0.05 | 0.94 | ○○○○○ 0.2 | 0.204640735030665 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 1,638,712 | 0.09 | 0.89 | ○○○○○ 0.22 | 0.221352974005821 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 1,639,438 | 0.14 | 0.85 | ○○○○○ 0.25 | 0.249918471811636 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 1,639,438 | 0.32 | 0.96 | ○○○○○ 0.34 | 0.343715732214842 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 1,639,180 | 0.51 | 0.91 | ○○○○○ 0.44 | 0.441194165933484 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 1,638,792 | 0.8 | 0.26 | ○○○○○ 0.59 | 0.59003255357789 | 23637626 |
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