Bacterial taxon 909946
Locus STM474_2773
Protein WP_001235094.1
ATP-dependent chaperone ClpB
Salmonella enterica Serovar Typhimurium ST4 74
Length 857 aa, Gene clpB, UniProt E8XIC8
>WP_001235094.1|Salmonella enterica Serovar Typhimurium ST4 74|ATP-dependent chaperone ClpB
MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAGINAGQLRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLTDLLKSAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEANDDRIVAVQ
Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,803,679 | -8.11 | 2.7e-9 | ●●●●● -4.03 | -4.03339080754162 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,805,063 | -5.13 | 5.0e-6 | ●●●○○ -2.49 | -2.48814256828249 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,803,327 | -4.96 | 6.4e-6 | ●●●○○ -2.4 | -2.39969312883897 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,803,327 | -3.81 | 0.0012 | ●●○○○ -1.8 | -1.80165631336541 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,802,544 | -2.36 | 0.04 | ●●○○○ -1.05 | -1.04735086892907 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,803,679 | -2.34 | 0.025 | ●●○○○ -1.04 | -1.03720860306544 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,802,544 | 1.56 | 0.045 | ○○○○○ 0.99 | 0.98845121108231 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,803,327 | -1.18 | 0.098 | ●○○○○ -0.43 | -0.434307594046879 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,803,679 | -0.95 | 0.2 | ●○○○○ -0.31 | -0.314439483549358 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,805,063 | -0.52 | 0.72 | ●○○○○ -0.09 | -0.0947661881487105 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,805,063 | -0.47 | 0.47 | ●○○○○ -0.07 | -0.0670448333082908 | 23637626 |
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