Bacterial taxon 909946
Locus STM474_0198
Protein WP_000938517.1
ATP-dependent helicase HrpB
Salmonella enterica Serovar Typhimurium ST4 74
Length 824 aa, Gene hrpB, UniProt E8XHY7
>WP_000938517.1|Salmonella enterica Serovar Typhimurium ST4 74|ATP-dependent helicase HrpB
MLQCGAKKVNPVEPFVTSLPVAAVLPELLTALKIAPQVLLSAPTGAGKSTWLPLQLLQQGPVAGKILLLEPRRLAARNVAQRLAEALNEKPGETVGYRMRAQSCVGPRTRLEVVTEGVLTRMIQRDPELRGVGLVILDEFHERSLQADLALALLLDIQQGLRDDLRLLIMSATLDNDRLCQRLPDAPTIVSEGRAFPVERRYQPLAAHLRFDEAVAMATAELLRNENGSLLLFLPGVGEIQRVHEHLASRVGSDVLLCPLYGALSLEAQRKAIVPAPAGMRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDARTGLTRLVTQRISQASMTQRAGRAGRLAPGICLHLLAKEQAERAAAQSDPEILHSDLSGLLMEVLQWGCHDPASLFWLDRPPEVNLQAARRLLLMLGALEGERLSARGRKMAAMGNDPRLAAMLVNAGEGDSAATAAMLAAILEDPPRGGGTDLSVVFSRRQPGWQQRSQQLLKRLQVRNGEPDSALIMPLLARAFSDRIARRRGQEGRYQLANGMGAMLDADDALGRHEWLIAPLLLQGSASPDARILLAQPLDIASLIQACPDLLRQSDTVEWDEAQGTLKAWRRMRIGQLTVSVQPLAKPSEEELHQAMLNGIRDKGLSVLNWTPEAEQFRLRLHCAAKWLPEYDWPAVDEASLLATLENWLLPHMTGVQSLRGLKSLNVNQALRGLLDYAMLQRLDSELPGHYTVPTGSRITIRYHEDNPPALAVRMQEMFGEAKTPTIAQGRVPLVLELLSPAQRPLQITRDLSAFWQGAYREVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS
Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 219,696 | -4.26 | 1.3e-10 | ●●●○○ -2.04 | -2.03767250228228 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 218,310 | 1.99 | 0.011 | ○○○○○ 1.21 | 1.20958806831529 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 219,696 | -0.1 | 0.98 | ○○○○○ 0.13 | 0.126561638764398 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 219,696 | -0.06 | 0.98 | ○○○○○ 0.14 | 0.144865822480301 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 218,310 | 0.35 | 0.95 | ○○○○○ 0.36 | 0.357599972761609 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 218,310 | 0.66 | 0.58 | ○○○○○ 0.52 | 0.521635699653329 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 220,014 | 0.79 | 0.82 | ○○○○○ 0.59 | 0.587060765731215 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 220,014 | 0.83 | 0.19 | ○○○○○ 0.61 | 0.607911580043015 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 220,014 | 1.87 | 0.31 | ○○○○○ 1.15 | 1.1491824392062 | 23637626 |
Retrieved 9 of 9 entries in 3 ms
(Link to these results)