Bacterial taxon 909946
Locus STM474_1653
Protein WP_000139702.1
ATP-dependent RNA helicase HrpA
Salmonella enterica Serovar Typhimurium ST4 74
Length 1,300 aa, Gene hrpA, UniProt E8XJX1
>WP_000139702.1|Salmonella enterica Serovar Typhimurium ST4 74|ATP-dependent RNA helicase HrpA
MTEQSTLTLQVLQQRLDALMLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEIEQAAAQVALREAARPSITYPQNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGSGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMTDGILLAEIQQDRLLMQYDTLIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITADEQQTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDTLFEFYDQRISHDVISARHFDSWWKKISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVTVDREDWHWDQVPEHLKITFRVVNDKNKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIWSFGELPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGFTALHEKVRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPARREDDDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMDQITA
Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 1,689,050 | -4.06 | 2.7e-14 | ●●○○○ -1.93 | -1.93298438747829 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 1,689,050 | -0.94 | 0.5 | ●○○○○ -0.31 | -0.308902181784848 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 1,689,050 | -0.43 | 0.89 | ●○○○○ -0.04 | -0.044452288829674 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 1,689,821 | 0.32 | 0.81 | ○○○○○ 0.34 | 0.341833563248328 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 1,691,517 | 0.54 | 0.48 | ○○○○○ 0.46 | 0.456503660542767 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 1,691,517 | 0.65 | 0.87 | ○○○○○ 0.51 | 0.513191108411353 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 1,689,821 | 0.8 | 0.82 | ○○○○○ 0.59 | 0.59031382222127 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 1,689,821 | 0.85 | 0.25 | ○○○○○ 0.62 | 0.619554700767821 | 23637626 |
Retrieved 8 of 8 entries in 1.6 ms
(Link to these results)