Bacterial taxon 909946
Locus STM474_2308
Protein WP_000957746.1
cyclic di-GMP phosphodiesterase
Salmonella enterica Serovar Typhimurium ST4 74
Length 518 aa, Gene rtn, UniProt E8XDQ5
>WP_000957746.1|Salmonella enterica Serovar Typhimurium ST4 74|cyclic di-GMP phosphodiesterase
MLTRDSSSGRKILLTCIITGIAAALLIGSLQFFLSWHKRDVKYNTLLSDVQHYLASYFADLKATTDILQPLTINTCQQVGAELTSRAAFSLNVRAFLLIKDKKVFCSSATGAMNMPLQQLVPDIDIRKDVAMAILPGTPMMPNKPTMVIWYRNPLLNDSGVFTSLNINLTPYLLYTTRQDDFNGIALIVGNTALSTFSSRLLTVAELPGTPSRLATINGLPLKIRLYADSWTYNDLWYALMLGCISGIVAGFICYFIYALRTRPGKEILTAIKHEQFYVVYQPVVDTRTLSVTGLEVLLRWRHPTAGEIPPDAFIHYAEAQQLIVPLTQHLFELIARDAPTLQKVMPVGAKFGINIAPEHLHSDSFKEDMHRLRDALPAHHFHIVLEITERDMLQQYEAAKLFEWLHSAGFEIAIDDFGTGHSALIYLERFTLDYLKIDRGFIQAIGTETVTSPVLDTVLTLSRRLNMLTVAEGVETPEQARWLRDHGVNYLQGYWISRPLPLKDFVLWMSAPSVPEW
Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,312,320 | -3.99 | 0.00018 | ●●○○○ -1.89 | -1.89345573264083 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,313,370 | -2.68 | 0.026 | ●●○○○ -1.22 | -1.21505621334502 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,313,126 | 1.72 | 0.018 | ○○○○○ 1.07 | 1.0679829412412 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,313,126 | -0.56 | 0.84 | ●○○○○ -0.11 | -0.114881761869665 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,313,370 | -0.33 | 0.92 | ○○○○○ 0.01 | 0.00785080554633311 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,312,320 | 0.24 | 0.7 | ○○○○○ 0.3 | 0.303907139737637 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,313,819 | 0.44 | 0.56 | ○○○○○ 0.41 | 0.407819633595913 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,313,126 | 0.55 | 0.66 | ○○○○○ 0.46 | 0.463396955884579 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,312,320 | 0.78 | 0.6 | ○○○○○ 0.58 | 0.583733250415575 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,313,819 | 1.05 | 0.71 | ○○○○○ 0.72 | 0.720280359591501 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,313,819 | 1.08 | 0.34 | ○○○○○ 0.74 | 0.738494968788193 | 23637626 |
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