Bacterial taxon 909946
Locus STM474_3655
Protein WP_000832802.1
DNA uptake porin HofQ
Salmonella enterica Serovar Typhimurium ST4 74
Length 412 aa, Gene hofQ, UniProt E8XEJ1
>WP_000832802.1|Salmonella enterica Serovar Typhimurium ST4 74|DNA uptake porin HofQ
MKRWIAIILIALMPAAQAGKAAKVTLVVDDVPVVQVLQTLAEQERQNLVVSPDVSGTLSLHLTDVPWKQALQTVVNSAGLVLRQEGNILHVHSQAWQKEHSARQDAERLRFQANLPLENRSISLQYADAGELAKAGEKLLSAKGTIMVDKRTNRLLLRDNRAALAELEKWVSQMDLPVAQVELAAHIVTINEKSLRELGVKWTLADATQAGSVGDVTTLSSDLSVAAATSRVGFNIGRINGRLLDLELSALEQKQLLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFSRKNKSGSDSVPLLGDIPWLGQLFRHDGKEDERRELVVFITPRLVATE
Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,664,762 | 1.99 | 0.013 | ○○○○○ 1.21 | 1.21040716992477 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,664,845 | -1.42 | 0.33 | ●○○○○ -0.56 | -0.562891513093304 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,664,845 | -0.1 | 0.91 | ○○○○○ 0.13 | 0.126000195673759 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,665,738 | -0.05 | 0.95 | ○○○○○ 0.15 | 0.151945619318373 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,665,428 | 0.14 | 1 | ○○○○○ 0.25 | 0.251086492154755 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,664,762 | 0.71 | 0.84 | ○○○○○ 0.55 | 0.547361758527419 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,664,845 | 0.76 | 0.57 | ○○○○○ 0.57 | 0.573215819652234 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,665,738 | 1.08 | 0.52 | ○○○○○ 0.74 | 0.739135455214787 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,665,428 | 1.19 | 0.12 | ○○○○○ 0.8 | 0.795831077616418 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,665,738 | 1.24 | 0.72 | ○○○○○ 0.82 | 0.821588653181697 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,664,762 | 2.03 | 0.36 | ○○○○○ 1.23 | 1.23275411021788 | 23637626 |
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