Bacterial taxon 909946
Locus STM474_2614
Protein WP_071822085.1
fibronectin-binding autotransporter adhesin ShdA
Salmonella enterica Serovar Typhimurium ST4 74
Length 2,050 aa, Gene shdA, UniProt E8XGK2
>WP_071822085.1|Salmonella enterica Serovar Typhimurium ST4 74|fibronectin-binding autotransporter adhesin ShdA
MNRTYSIVWSAVRNMYVVASELARGHSKVKAQVCASETHSPNQKSEYGQIIKATRAALACAVAAALGFFSPLAMADNQVSYADAQPHVLDASTPPISYSGTDEGAALYVSGVATVGWQPTTVTGTGLVIETSGGGADDPDGGKYVSNAISLDHYAILELTDAKITTTGIYTQGISAADGSTLRLTDSTLTIDGNFGVMTLYTGSEATLDGTIVEAANSSSAQVQQGSTLNVLDGSTITLAQGQINVVAGNTATDEGSTLNLSDSSVSSAGTMSTIQGTNKAALNLTNATITHTNASGAAVQANNATTLDITGGNITSAGTGVYILASDARIDGATINADGDGIFITSKRKLDGYEDLNALTVSDANVTSKTVALNIDGSTTINDPIELTNSTFTAPTAIKLGSKATIQAEKTMLTGNIVQTDASSSSLSLSQGSTLTGSVDAMFTTLSLDDTSQRNMTDPSTVGNLTNDGDITLGNASGSTGTLLTVDNTLTLQDGSQINATLDTANSAPIIKAANVTLDGTLNLSSTATFVAPETDEHFGSITLIDSQTAITTDFDSVTLDADTSAMPDYLTINAGVDANDNTNYELSTGLSWYAGANSARAAHGTFTVDAGSTFTVTSELDETTATSNWNGSKLTKQGDGTLILSNTGNDYGDTEIDGGILAAKDAAALGTGDVTIAESATLALSQGTLDNNVTGEGQIVKSGSDELIVTGDNNYSGGTTISGGTLTADHADSLGSGDIDNSGVLKVGEGELENILSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTLTADHADSLGSGDIDNSGVLKVGEGDLENTLSGSGSLVKTGTGELTLSGGNDYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLGGDNSYSGATTITDGTLIAANVNALGSGNIDNSGTLILDANGAFELANVTTHSGATTALAAGSTLDAGQFTQEDGSTLSIDLGAATDDAVITADSVALGGTLNVTGIGSVTDSWTPEAYTYTLIGSDSAITTDFDDLTVAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYADRDNATTDAHGTFTLSDPDGSFNVAATLTDVDDTLDPGSRWDGKSLTKEGAGTLILSGDNDYSGGTTINEGTLVAASTTALGTGLVDNNATLVLDADGEVSAVGGITTHSGATTQLALGTSLDLGDSALIQQDGSTLNVELNSDSVQPLITGSSATLGGDLVVSDASLQARASDAEFQSFKLMDMTSDISGDFTSLTMNLTDKPDYLTVTGTINPEDASEYLLTEGLSWNATATSATPAHGTFTLGAGDSFEVTSVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYSGDTNVQEGTLWLSGDGSIGEMGSQQAVNVASGATFGGSNGTTVNGKVTNEGTLVFGNSEETGAIFTLNGDLINMGTMTSGSSSSTPGNTLYVDGNYTGNGGSLYLNTVLGDDDSATDKLVITGDASGTTDLYINGIGDGAQTTNGIEVVDVGGVSTSDAFELKNEVNAGLYTYRLYWNESDNDWYLASKAQSDDDDSGGDDTPSDGGDDGGNVTPPDDGGDGGNVTPPDDGGDGGDVTPPDHGGDVAPQYRADIGAYMGNQWMARNLQMQTLYDREGSQYRNADGSVWARFKAGKAESEAVSGNIDMDSNYSQFQLGGDILAWGNGQQSVTVGVMASYINADTDSTGNRGADGSQFTSSGNVDGYNLGVYATWFADAQTHSGAYVDSWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYDIALSNGNTVSLTPQAQVVWQNYSADSVKDNYGTRIDGQDGDSWTTRLGLRVDGKLYKGSRTVIQPFAEANWLHTSDDVSVSFDDATVKQDLPANRAELKVGLQADIDKQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW
Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,631,371 | -2.66 | 1.1e-7 | ●●○○○ -1.21 | -1.20662584613329 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,626,419 | -2.43 | 1.7e-6 | ●●○○○ -1.09 | -1.08722869177124 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,625,688 | 2.14 | 0.0031 | ○○○○○ 1.29 | 1.28682368789695 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,631,371 | -1.44 | 0.33 | ●○○○○ -0.57 | -0.569119403730196 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,626,419 | -1.4 | 0.31 | ●○○○○ -0.55 | -0.552166727751024 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,626,419 | -1.14 | 0.61 | ●○○○○ -0.42 | -0.415661853402843 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,626,725 | -0.59 | 0.64 | ●○○○○ -0.13 | -0.129042844940433 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,631,201 | -0.29 | 0.62 | ○○○○○ 0.03 | 0.0279994284562219 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,631,201 | -0.13 | 0.99 | ○○○○○ 0.11 | 0.111755101502402 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,631,201 | 0.7 | 0.53 | ○○○○○ 0.54 | 0.541853628228812 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,626,725 | 0.72 | 0.93 | ○○○○○ 0.55 | 0.551767247609885 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,626,725 | 0.82 | 0.28 | ○○○○○ 0.61 | 0.60523385675448 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,625,688 | 1.05 | 0.7 | ○○○○○ 0.72 | 0.721832452120448 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,625,688 | 1.32 | 0.29 | ○○○○○ 0.86 | 0.864762414407805 | 23637626 |
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(Link to these results)