Bacterial taxon 909946
Locus STM474_0567
Protein WP_000754233.1
fimbrial biogenesis outer membrane usher protein
Salmonella enterica Serovar Typhimurium ST4 74
Length 870 aa, Gene fimD, UniProt E8X921
>WP_000754233.1|Salmonella enterica Serovar Typhimurium ST4 74|fimbrial biogenesis outer membrane usher protein
MKKTTWFAGRFPGYVSPLSSVALSVLAALCPLTSRGESYFNPAFLSADTASVADLSRFEKGNHQPPGIYRVDIWRNDEFVATQDIRFEAGAVGTGDKSGGLMPCFTPEWIKRLGVNTAAFPVSDKGVDTTCIHLPEKIPGAEVAFDFASMRLNISLPQASLLNSARGYIPPEEWDEGIPAALINYSFTGSRGTDSDSYFLSLLSGLNYGPWRLRNNGAWNYSKGDGYHSQRWNNIGTWVQRAIIPLKSELVMGDSNTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVSPGAFAITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPLLQREGRVKYDLVAGDFRSGNSQQSSPFFFQGTVIAGLPAGLTAYGGTQLADRYRAVVVGAGRNLGDWGAVSVDVTHARSQLADDSTHQGQSLRFLYAKSLNNYGTNFQLLGYRYSTRGFYTLDDVAYRSMEGYDYEYDSDGRRHKVPVAQSYHNLRYSKKGRFQVNISQNLGDYGSLYLSGSQQNYWNTADTNTWYQLGYASGWQGISYSLSWSWSESVGSSGADRILAFNMSVPFSVLTGRRYARDTILDRTYATFNANRNRDGDNSWQTGVGGTLLEGRNLSYSVTQGRSSSNGYSGSASASWQATYGTLGVGYNYDRDQHDYNWQLSGGVVGHADGITFSQPLGDTNVLIKAPGAKGVRIENQTGVKTDWRGYAVMPYATVYRYNRVALDTNTMDNHTDVENNVSSVVPTEGALVRAAFDTRIGVRAIITARLGGRPLPFGAIVRETASGITSMVGDDGQIYLSGLPLKGELFIQWGEGKNARCIAPYALAEDSLKQAITIASATCIRPAS
Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 606,250 | -3.99 | 0.00011 | ●●○○○ -1.89 | -1.89283321190706 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 606,862 | -3.4 | 5.9e-11 | ●●○○○ -1.59 | -1.58609832904047 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 606,862 | -2.25 | 0.018 | ●○○○○ -0.99 | -0.990214019082576 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 606,862 | -0.27 | 0.94 | ○○○○○ 0.04 | 0.0370965552649808 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 606,250 | -0.23 | 0.95 | ○○○○○ 0.06 | 0.0597697768436686 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 606,250 | 1.01 | 0.18 | ○○○○○ 0.7 | 0.700978451293512 | 23637626 |
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