Bacterial taxon 909946
Locus STM474_3810
Protein WP_000220312.1
outer membrane usher protein LpfC
Salmonella enterica Serovar Typhimurium ST4 74
Length 842 aa, Gene lpfC, UniProt E8XFV3
>WP_000220312.1|Salmonella enterica Serovar Typhimurium ST4 74|outer membrane usher protein LpfC
MTWTHLPLGNKTSRFTQSALALMIAGTLPAYAGTFNPRFLEDVPGIDQHVDLSMYESNKAEHLPGKYRVSVVVNEKKMESRTLEFKAATEAQRAKMGESLVPCLSRVQLEDMGVRIDSFPALKMAPPEACVAFDDIIPQAASHFDFADQTLIMSFPQAAMKQTARGTVPESQWDEGVNALLVDYNFSGSNASYDAHDSETSYNSDSYYLNLRSGMNLGAWRLRNYSTWTRNDGNNTWDNIGTSLSRAIVPLKSQLTLGDTSTAGDIFDSVQMRGVQLTSDEEMLPDSQRGFAPVIRGIAKSNAEVTVEQNNYVIYRTFVQPGAFEINDLYPTSNSGDLTVTIKESDGSEQKFVQPFSSVALLQREGHLKYSLSAGEYRAGNYNSAEPKFGQLDAMYGLPYGFTVYGGAIFSDDYYSLAGGLGKNFGYIGAISIDVTQAKSKLANEENSEGQSYRFLYSKSFNSGTDFRLLGYKYSTSGYYTFQEATDVRSDADSSYSQYHKRSQIQGNVTQQLGAWGSVYFNVTQQDYWNDEGKQRSLNAGYNGRIGRVNYSVAYTWTKSPEWDESDRLLSFSMSIPLGRVWSNYHLTTDQHGRTNQQLGVSGTALEDHNLNYSVQEGYGSNGVGNSGSVNLDYQGGVGSASLGYNYNRDGQQVNYGLRGGVIAHSEGITLSQPLGESMAIISAPGARGAHVINNGGVEVDWMGNAVVPYLTPYRETEVSLRSDSLNNQVDLDTASVNVVPTRGAIVRARFDTRVGYRVLMNLTQANGKAVPFGATATLLDTTKESSSIVGEDGQLYISGMPEKGALQVNWGKDQAQQCRVAFTLPEQQDNTGVVMANAVCR
| Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,847,822 | -2.6 | 0.0072 | ●●○○○ -1.17 | -1.17393692503649 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,847,660 | -2.32 | 3.4e-6 | ●●○○○ -1.03 | -1.02584031823255 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,847,822 | -1.9 | 0.0043 | ●○○○○ -0.81 | -0.811078512445926 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,847,318 | -1.29 | 0.046 | ●○○○○ -0.49 | -0.492939289763896 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,847,660 | -1.4 | 0.17 | ●○○○○ -0.55 | -0.54844155861162 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,847,822 | -1.07 | 0.64 | ●○○○○ -0.38 | -0.37686993582126 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,847,318 | -0.94 | 0.51 | ●○○○○ -0.31 | -0.312030423058631 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,847,660 | -0.9 | 0.67 | ●○○○○ -0.29 | -0.291773758798003 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,847,229 | -0.82 | 0.72 | ●○○○○ -0.25 | -0.248931143797788 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,847,219 | -0.14 | 0.87 | ○○○○○ 0.1 | 0.103209476542551 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,846,123 | 0.21 | 0.98 | ○○○○○ 0.29 | 0.286653297052181 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,847,229 | 0.24 | 0.89 | ○○○○○ 0.3 | 0.301509884828494 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,847,219 | 0.43 | 0.8 | ○○○○○ 0.4 | 0.399458641637952 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,847,318 | 0.54 | 0.9 | ○○○○○ 0.46 | 0.456263374140021 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,847,219 | 0.61 | 0.88 | ○○○○○ 0.49 | 0.49243315847753 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,847,229 | 0.66 | 0.22 | ○○○○○ 0.52 | 0.519736189210289 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,846,123 | 0.72 | 0.34 | ○○○○○ 0.55 | 0.5495793232722 | 23637626 |
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