Bacterial taxon 909946
Locus STM474_3282
Protein WP_000540889.1
polysaccharide deacetylase
Salmonella enterica Serovar Typhimurium ST4 74
Length 307 aa, Gene n/a, UniProt E8XAI2
>WP_000540889.1|Salmonella enterica Serovar Typhimurium ST4 74|polysaccharide deacetylase
MGYLKLPEGKRIAVNLGVDVDAQSLWLGGFNRPSPSFMSRGEFGAQVGVPRLLKLFKENNIKTTFFIPGHTVDTFPEIIKAIFDAGHEIAHHGYYHENPTLVNRDTERRLMDLAFACYKRHFGIRPVGYRSPYWDYSENTLDLLEEAGFLYDSSLMARDLVPYHPQRWQVNWETGNIAGPASAILEIPVSWYLDDFPALAYTGNQEGMSDTDGVLRRWKDIFTYAYHHQENSLYAMALHPQIIGHGHHMMMLLRLIEHIKGHDGVWFATCEEIASVWVDDEEDRQKMLRPDVRGVAPVPDDYGWPGK
Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,313,428 | -8.29 | 1.7e-26 | ●●●●● -4.13 | -4.13015269392217 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,313,428 | -5.8 | 6.6e-7 | ●●●○○ -2.84 | -2.83646043193805 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,313,065 | -3.56 | 7.3e-7 | ●●○○○ -1.67 | -1.67020834142736 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,313,112 | -3.5 | 2.5e-11 | ●●○○○ -1.64 | -1.64139864989483 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,313,112 | -3.1 | 0.0047 | ●●○○○ -1.43 | -1.43082264021324 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,313,496 | -2.72 | 0.0055 | ●●○○○ -1.23 | -1.23453319094497 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,313,065 | -2.67 | 0.0026 | ●●○○○ -1.21 | -1.21041711001536 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,313,496 | -1.51 | 0.037 | ●○○○○ -0.61 | -0.608098544136189 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,313,496 | -1 | 0.61 | ●○○○○ -0.34 | -0.343281792720289 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,313,065 | -0.99 | 0.62 | ●○○○○ -0.34 | -0.338934280972063 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,312,887 | -0.71 | 0.87 | ●○○○○ -0.19 | -0.189563341272969 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,312,887 | -0.13 | 0.93 | ○○○○○ 0.11 | 0.107619708007063 | 23637626 |
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