Bacterial taxon 909946
Locus STM474_2364
Protein WP_000865526.1
porin OmpC
Salmonella enterica Serovar Typhimurium ST4 74
Length 378 aa, Gene ompC, UniProt E8XEB0
>WP_000865526.1|Salmonella enterica Serovar Typhimurium ST4 74|porin OmpC
MKVKVLSLLVPALLVAGAANAAEIYNKDGNKLDLFGKVDGLHYFSDDKGSDGDQTYMRIGFKGETQVNDQLTGYGQWEYQIQGNQTEGSNDSWTRVAFAGLKFADAGSFDYGRNYGVTYDVTSWTDVLPEFGGDTYGADNFMQQRGNGYATYRNTDFFGLVDGLDFALQYQGKNGSVSGENTNGRSLLNQNGDGYGGSLTYAIGEGFSVGGAITTSKRTADQNNTANARLYGNGDRATVYTGGLKYDANNIYLAAQYSQTYNATRFGTSNGSNPSTSYGFANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDISNGYGASYGDQDIVKYVDVGATYYFNKNMSTYVDYKINLLDKNDFTRDAGINTDDIVALGLVYQF
Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,363,206 | -3.32 | 0.0017 | ●●○○○ -1.55 | -1.54888560338799 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,363,206 | -2.57 | 0.02 | ●●○○○ -1.16 | -1.15742813539356 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,364,264 | -2.36 | 0.05 | ●●○○○ -1.05 | -1.04996955703928 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,364,264 | 1.64 | 0.025 | ○○○○○ 1.03 | 1.02918042756202 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 2,363,947 | -0.71 | 0.57 | ●○○○○ -0.19 | -0.190896383736114 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,363,947 | -0.65 | 0.3 | ●○○○○ -0.16 | -0.160004379343051 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 2,364,191 | -0.49 | 0.46 | ●○○○○ -0.08 | -0.0780152576301605 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,364,264 | 0.44 | 0.93 | ○○○○○ 0.41 | 0.405140849866715 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,363,947 | 0.57 | 0.89 | ○○○○○ 0.47 | 0.470882986664259 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 2,364,191 | 0.62 | 0.87 | ○○○○○ 0.5 | 0.501213214047316 | 23637626 |
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