Bacterial taxon 909946
Locus STM474_0100
Protein WP_001116976.1
RNA polymerase-associated protein RapA
Salmonella enterica Serovar Typhimurium ST4 74
Length 968 aa, Gene hepA, UniProt E8XH05
>WP_001116976.1|Salmonella enterica Serovar Typhimurium ST4 74|RNA polymerase-associated protein RapA
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHEGWQLHIDEVKEENGLLVYVGTRLDTEETNVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPYSGLRGQRTNLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYTEAQHDAYNPFETEQLVICSLDFARRNKQRLEHLCDAEWDLLVVDEAHHLVWSTDAPSREYMAIEQLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQKNYRPVADAVAMLLAGNKLSNDELNRLGDLIGEQDIEPLLQAANSDRDDAQAARDELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTVKLPLPTQYQTAIKVSGIMGARKSPEDRARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSAYASLINYLAAPEETDGFDDLIKSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQQLAQSIEEQDDDTNLIAFAMNLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEKSARALIDNARREADEKLSGELSRLEALRAVNPNIRDDELAAIDSNRQQVLESLNQAGWRLDALRLIVVTHQ
Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 111,960 | -3.63 | 9.8e-5 | ●●○○○ -1.71 | -1.71039311666113 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 112,893 | -2.7 | 0.0028 | ●●○○○ -1.23 | -1.22577036831494 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 110,729 | -1.27 | 0.58 | ●○○○○ -0.48 | -0.483443187475405 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 110,729 | -0.92 | 0.14 | ●○○○○ -0.3 | -0.300196282280164 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 111,960 | -0.76 | 0.74 | ●○○○○ -0.22 | -0.219699829989794 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 112,893 | -0.08 | 0.98 | ○○○○○ 0.14 | 0.136111982437017 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 111,960 | -0.03 | 0.97 | ○○○○○ 0.16 | 0.162383313460605 | 23637626 |
Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 111,452 | 0.87 | 0.58 | ○○○○○ 0.63 | 0.628483657370706 | 23637626 |
Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 111,452 | 0.94 | 0.75 | ○○○○○ 0.67 | 0.667566274870343 | 23637626 |
Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 111,452 | 1.08 | 0.15 | ○○○○○ 0.74 | 0.736432277195818 | 23637626 |
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(Link to these results)