Bacterial taxon 909946
Locus STM474_3079
Protein WP_000144831.1
type I-E CRISPR-associated endonuclease Cas1
Salmonella enterica Serovar Typhimurium ST4 74
Length 306 aa, Gene cas1, UniProt E8X8L8
Protein visualisation (by ProViz)
>WP_000144831.1|Salmonella enterica Serovar Typhimurium ST4 74|type I-E CRISPR-associated endonuclease Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRAVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
| Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 3,101,462 | 2.46 | 0.0044 | ○○○○○ 1.46 | 1.45564640544909 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 3,101,462 | -0.35 | 0.91 | ●○○○○ -0.01 | -0.00606115186579881 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 3,101,462 | 1.81 | 0.45 | ○○○○○ 1.12 | 1.11785384848395 | 23637626 |
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