Bacterial taxon 909946
Locus STM474_0151
Protein WP_000650592.1
type II secretion system protein GspE
Salmonella enterica Serovar Typhimurium ST4 74
Length 461 aa, Gene hofB, UniProt E8XH54
>WP_000650592.1|Salmonella enterica Serovar Typhimurium ST4 74|type II secretion system protein GspE
MKDAQLNTLCQRHQAVLINSASNSITVAVVDAPSHALLDALHFATQKQIDIVCWTRQQMENHRHKPDQAPSANAAKGGETAAQLLNQTLRSAMAKRASDIHLEPGASRYRIRLRIDGVLHILQDIAKETGLALTARLKVLGNLDIAEHRLPQDGQFTVDLAGDSISFRIATLPCKEGEKVVLRLLHQVEQTLDLDTLGMYGAQLTAFRQALQQPQGLVLVTGPTGSGKTVTLYSALQTRNTPGINLCSVEDPIEIPLDGINQTQIHPRAGLTFQNVLRALLRQDPDIIMVGEIRDGDTAEIAIKAAQTGHLVLSTLHTNSTSETLIRLQQMGVARWMISSALTLVVAQRLVRKLCPHCKQRLSDPVVLSPNLWPSAIPRWQASGCQHCYHGFYGRTALFEVLTVTPALRQLIASGASAQALEAHLQQTGTGTLFENGCRAVEQGMTSFEEILRVLGMPHER
| Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 166,752 | 1.96 | 0.013 | ○○○○○ 1.2 | 1.19702491301018 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 166,636 | 0.11 | 0.95 | ○○○○○ 0.23 | 0.23346706073307 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 166,636 | 0.7 | 0.99 | ○○○○○ 0.54 | 0.542101831065186 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 166,752 | 0.81 | 0.63 | ○○○○○ 0.6 | 0.595983770987381 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 166,752 | 1.29 | 0.57 | ○○○○○ 0.85 | 0.84798971733198 | 23637626 |
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(Link to these results)