Bacterial taxon 909946
Locus STM474_0297
Protein WP_001168956.1
type VI secretion system membrane subunit TssM
Salmonella enterica Serovar Typhimurium ST4 74
Length 1,289 aa, Gene sciS, UniProt E8XIV0
>WP_001168956.1|Salmonella enterica Serovar Typhimurium ST4 74|type VI secretion system membrane subunit TssM
MQKFLSLLFSRRALAVVGVLVLALLVWFVGPLVSFDTLRPLASVGSRVVTIALLLMLLVLWLVNWSMSIIGISVLCLAIGFVTPLLALGDVHPFAPLWVRLTLIGFILLMYALYGLYRLWRALRMDEQLLRRFLHPRGEEVPVAGEIKADLRTVNHIVTQAIRQLRQLRVDMPGWRKIFEGKRFLYELPWFMVVGSPGDGKTTALLNTGLQFPLAEQMEQTSRILTVPGGGTLHCDWWFTNEAVLIDTAGRYARHDDGGEASAAQRNAGEWQGFLGLLRKHRPGAPLNGVILTLNVADLTAQSPAERLAACAALRARLAELRETLGIRFPVYLVVTKMDLLPGFSEYFRTLTSHLRAQIWGFTLPYSRRRKAGDPQALHAACAQELARLTLRLDQGLDTRLQEEYDLKSRQRLYTFPREFAALGEPLLEAIEQIFLDSKFDATQLNNTLRGVFFTSAAQAQADAVADQLSIWQRFVRAIKTARGESSASLPHALPDGNRSYFLHDLLTQFIFREAHLVEPNLQWAWRYRLLRLGGHLLVLVLAFLLWQGMQTSQQTNGDYLNEISARATRLDGDVKAYTGKPAMAPVPALLDSARELSAWPELDPDAPPLAWRYGLYSVPPVTDSVASLYNRLLDQLLLPPLVKRMEYVLADAIARQDSKAAYDALRIYLLLNLDKDHEDKYNAAEIQSWVINDLGNSDSVAGFGGRAAVLTHIEALFDGSRVVHSPYEKDEALIRQARAFLDGHTSTERIYARALAAMESEAPQEFTLVRAVGADAGTVFVRSNGAPLDRGVPGIFTREGYRELFDKRLPEFVAAATANDGWVMGRESTPKKLTDSLRSQIPGQEQSVAREVRRLYLTEYARRWQDFLDSIHSINSAGEEGSSGLAYDLQVLRTLASPDSPLMRLGKAVVEQTTLVPPPDPQARQKQLAQRASGNAGKVVQTAKLFQDIHPEERLEKTLVDDRFAALREVIAGRTDGGQSGGGTMQIASLLTMLNEYYTQLTIADSALAAGTLPARITAADKLQLEAAKLPAPLKNILLDLTKQGTRKINAGTGDVLNTQMEAMMGDDCRDAIDGRYPFADSPQEVSAEDFNRIFASGGVLDAFWSKQLAPLADTASDPWRYKPTEGNMTLQGPDLTPFQQAKQIRSVFFNSEGGKKFSWSMQISVVDMDPAITELVIDIDGQVLRYAHGPDRPLKVTWPGPRNGSMAEITASPRIRQDTSTLLTGGPWALFHLLDAGMVQETAVRGRQLVEYDFDGRRVVLEITAGRDFNPVSRELLQNFSCPARAL
| Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 326,837 | -4.52 | 2.7e-16 | ●●●○○ -2.17 | -2.17153203780801 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 326,837 | -2.87 | 0.0085 | ●●○○○ -1.31 | -1.31156718554703 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 323,879 | -1.95 | 0.00014 | ●○○○○ -0.83 | -0.833843628322689 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 323,879 | -1.2 | 0.49 | ●○○○○ -0.45 | -0.447199983461071 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 323,879 | -1.06 | 0.47 | ●○○○○ -0.37 | -0.373750032145346 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 324,491 | -0.32 | 0.92 | ○○○○○ 0.01 | 0.0123459782041013 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 325,879 | 0.14 | 0.96 | ○○○○○ 0.25 | 0.247346199532004 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 325,879 | 0.25 | 0.98 | ○○○○○ 0.31 | 0.306064015806013 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 324,112 | 0.25 | 0.76 | ○○○○○ 0.31 | 0.308731928720127 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 324,491 | 0.27 | 0.66 | ○○○○○ 0.32 | 0.316212467746617 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 325,879 | 0.58 | 0.34 | ○○○○○ 0.48 | 0.476257741362709 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 324,102 | 0.8 | 0.68 | ○○○○○ 0.59 | 0.590611259209217 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 324,102 | 0.81 | 0.83 | ○○○○○ 0.6 | 0.596196408554991 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 324,112 | 0.81 | 0.81 | ○○○○○ 0.6 | 0.597656057870202 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 326,254 | 0.9 | 0.16 | ○○○○○ 0.64 | 0.643807134009576 | 23637626 |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 324,102 | 1.28 | 0.1 | ○○○○○ 0.84 | 0.843499649018619 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 324,491 | 1.98 | 0.2 | ○○○○○ 1.2 | 1.20379123590236 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 326,254 | 3.46 | 0.87 | ○○○○○ 1.97 | 1.9728947345947 | 23637626 |
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