Bacterial taxon 909946
Locus STM474_1608
Protein WP_000165648.1
virulence effector SrfC
Salmonella enterica Serovar Typhimurium ST4 74
Length 714 aa, Gene srfC, UniProt E8XJ43
>WP_000165648.1|Salmonella enterica Serovar Typhimurium ST4 74|virulence effector SrfC
MTKPLNTTQAVIEWVNNTRRYATRLDDEADALLAQLTLAAADESALNAACASHGCVGLYGYAQSAKAHLLTTLCGNENGKLEIITPDRDYDYFSHINPGHAPANMAIRFTRDIFSNESGWPLRLRLISEAELVQIFIAWTSSSPVCRQVEKSIITSRLEKWQSLRQPQPVPGVTAEEVATIASFWRSCLPSARQHIDDATWQHFASLLPALDLTTRAHAWALLWGEQPEITQQWLALAHMLQQTGHAGELAAPLSLLVDHFGLPAENFLTQMALTANDTQSDVVVHPVKEGRLLNAVSLSLDSLALLTRELVLSVENNVLDNVDLLDIPVAPDSHPHPLWRAKLGWMLAHYRQQVQPDVLVICNALASRSQTSTAAHHLLEWVNATQPQHESALPGVVWAITPQDARFATQQNLDEAVQQLMGKPGVHWGTLQALDKHSMQRLVEWLSQATSAPQRQARLQALREQLRGRVRDLLPMFDDARLPVETVIRRLQAQAARHGDLLAGLLPPVQNFEALLSTRQSREEQVCGLFNDAIDLFADEPTRASASEGHETGYQAHKMWINHLRQWAHCRDNAQRLGLEPQMLNAVAEILITASYRLGLPQQLQKTMQREEVSGAQLHAIIGNFIAWLGYANIEEAQRPASRVQKGAAIFAATPRSTMLRLTKLDEQPVHAASRYVYDWLVALYTLANENAGYRHPQDVTDVDRAQLIALIA
| Host |
Tissue |
Tissue Ontology |
Time Post Infection |
Transposon Insertion Site |
Raw Fitness Score |
p-Value |
Fitness z-Score |
Precise fitness z-Score |
Reference |
| Cow (Bos taurus) | ileal mucosa | BTO:0000619 | 4 days | 1,641,214 | 3.07 | 0.00027 | ○○○○○ 1.77 | 1.77348770766116 | 23637626 |
| Pig (Sus scrofa) | colonic mucosa | BTO:0000271 | 3 days | 1,641,214 | -1.78 | 0.08 | ●○○○○ -0.75 | -0.746963498768424 | 23637626 |
| Chicken (Gallus gallus) | cecum | BTO:0000166 | 4 days | 1,641,214 | 1.56 | 0.8 | ○○○○○ 0.99 | 0.987672518390011 | 23637626 |
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(Link to these results)