BacFITBase
Search
BLAST
Browse
(current)
Download
Tutorial
About
Search
Browse BacFITBase
Pathogen
Any pathogen
Acinetobacter baumannii ATCC 17978
Campylobacter jejuni subsp. jejuni 81-176
Escherichia coli CFT073
Escherichia coli M12
Escherichia coli O157:H7 str. EDL933
Haemophilus influenzae Rd KW20
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
Mycobacterium avium subsp. paratuberculosis K10
Porphyromonas gingivalis ATCC 33277
Salmonella enterica Serovar Typhimurium SL1344
Salmonella enterica Serovar Typhimurium ST4 74
Serratia marcescens Strain UMH9
Streptococcus pyogenes M1 5448
Vibrio cholerae O1 biovar El Tor str. N16961
Vibrio parahaemolyticus RIMD 2210633
Sorted by significance (p<0.05) and Fitness z-Scores (highest impact first):
Download Table
Pathogen
Locus
Protein
UniProt
Gene
Length
Product
p-Value
Fitness z-Score
Precise fitness z-Score
Escherichia coli M12
CO715_17755
ATI07401.1
155 aa
type III secretion protein
0.014
○○○○○ 0.39
0.391301787945331
Escherichia coli M12
CO715_21175
ATI08017.1
1237 aa
AIDA-I family autotransporter YfaL
0.00011
○○○○○ 0.39
0.394431478159064
Escherichia coli M12
CO715_23205
ATI08376.1
655 aa
YjhG/YagF family D-xylonate dehydratase
9.2e-5
○○○○○ 0.4
0.395683354244557
Escherichia coli M12
CO715_16430
ATI07160.1
783 aa
DNA polymerase II
0.0055
○○○○○ 0.4
0.397769814387046
Escherichia coli M12
CO715_00515
ATI04349.1
513 aa
D-xylose ABC transporter ATP-binding protein
2.3e-12
○○○○○ 0.4
0.398187106415544
Escherichia coli M12
CO715_01800
ATI04575.1
105 aa
ribose-5-phosphate isomerase
0.016
○○○○○ 0.4
0.400899504600779
Escherichia coli M12
CO715_06150
ATI05336.1
1806 aa
outer membrane autotransporter barrel domain-containing protein
0.016
○○○○○ 0.4
0.403403256771765
Escherichia coli M12
CO715_12705
ATI06490.1
384 aa
AgaS family sugar isomerase
0.012
○○○○○ 0.4
0.404237840828761
Escherichia coli M12
CO715_03800
ATI04941.1
200 aa
histidine phosphatase family protein
2.7e-8
○○○○○ 0.41
0.408410761113738
Escherichia coli M12
CO715_18120
ATI07464.1
246 aa
oxidative stress defense protein
0.033
○○○○○ 0.41
0.409036699156484
Escherichia coli M12
CO715_03010
ATI04798.1
575 aa
phosphoenolpyruvate--protein phosphotransferase
0.023
○○○○○ 0.41
0.409245345170733
Escherichia coli M12
CO715_18360
ATI07508.1
433 aa
TRAP transporter permease DctM
0.0012
○○○○○ 0.41
0.410079929227729
Escherichia coli M12
CO715_01945
ATI04601.1
527 aa
cyclic diguanylate phosphodiesterase
0.00043
○○○○○ 0.41
0.410497221256227
Escherichia coli M12
CO715_23120
ATI08363.1
69 aa
DNA helicase
0.023
○○○○○ 0.41
0.411123159298973
Escherichia coli M12
CO715_12050
ATI06375.1
304 aa
short-chain dehydrogenase
2.6e-6
○○○○○ 0.41
0.411540451327471
Escherichia coli M12
CO715_12075
ATI06380.1
350 aa
glycolate oxidase subunit GlcE
0.045
○○○○○ 0.41
0.412375035384466
Escherichia coli M12
CO715_24695
ATI08625.1
551 aa
L-lactate permease
0.0012
○○○○○ 0.42
0.416339309655195
Escherichia coli M12
CO715_00840
ATI04407.1
430 aa
MFS transporter
0.0021
○○○○○ 0.42
0.417591185740688
Escherichia coli M12
CO715_01520
ATI04526.1
418 aa
L-methionine/branched-chain amino acid transporter
6.0e-5
○○○○○ 0.42
0.418008477769185
Escherichia coli M12
CO715_23005
ATI08342.1
276 aa
hypothetical protein
0.00068
○○○○○ 0.42
0.418843061826181
Escherichia coli M12
CO715_13855
ATI06695.1
303 aa
hypothetical protein
0.00049
○○○○○ 0.42
0.41905170784043
Escherichia coli M12
CO715_15140
ATI06931.1
196 aa
helix-turn-helix transcriptional regulator
1.4e-8
○○○○○ 0.42
0.419468999868927
Escherichia coli M12
CO715_05705
ATI05266.1
346 aa
minor capsid protein E
0.00031
○○○○○ 0.42
0.420512229940172
Escherichia coli M12
CO715_17605
ATI07375.1
409 aa
transporter
4.1e-6
○○○○○ 0.42
0.421138167982918
Escherichia coli M12
CO715_23525
ATI08419.1
259 aa
iron export permease FetB
0.022
○○○○○ 0.42
0.424059212182403
Escherichia coli M12
CO715_15555
ATI07002.1
517 aa
bifunctional metallophosphatase/5'-nucleotidase
0.0029
○○○○○ 0.43
0.42823213246738
Escherichia coli M12
CO715_00530
ATI04352.1
484 aa
xylulokinase
0.044
○○○○○ 0.43
0.429901300581371
Escherichia coli M12
CO715_15065
ATI06918.1
296 aa
AraC family transcriptional regulator
0.015
○○○○○ 0.43
0.433865574852099
Escherichia coli M12
CO715_23225
ATI08380.1
334 aa
multidrug DMT transporter permease
0.012
○○○○○ 0.43
0.434491512894845
Escherichia coli M12
CO715_12545
ATI06461.1
298 aa
LysR family transcriptional regulator
0.011
○○○○○ 0.44
0.435743388980339
Escherichia coli M12
CO715_24350
ATI08566.1
494 aa
type VI secretion system contractile sheath large subunit
0.049
○○○○○ 0.44
0.436160681008836
Escherichia coli M12
CO715_15965
ATI07075.1
204 aa
YigZ family protein
0.021
○○○○○ 0.44
0.439081725208321
Escherichia coli M12
CO715_15680
ATI07025.1
366 aa
tRNA (uridine(54)-C5)-methyltransferase TrmA
0.0018
○○○○○ 0.44
0.441794123393556
Escherichia coli M12
CO715_24625
ATI08612.1
614 aa
selenocysteinyl-tRNA-specific translation elongation factor SelB
0.024
○○○○○ 0.44
0.442211415422053
Escherichia coli M12
CO715_06280
ATI05361.1
715 aa
TonB-dependent receptor
0.016
○○○○○ 0.44
0.443045999479049
Escherichia coli M12
CO715_16005
ATI08834.1
866 aa
outer membrane usher protein
0.0095
○○○○○ 0.45
0.445967043678533
Escherichia coli M12
CO715_14475
ATI06808.1
540 aa
DUF4049 domain-containing protein
0.047
○○○○○ 0.45
0.446592981721279
Escherichia coli M12
CO715_06225
ATI05351.1
239 aa
fimbrial chaperone protein FimC
0.0012
○○○○○ 0.45
0.447218919764026
Escherichia coli M12
CO715_09325
ATI05894.1
243 aa
fimbrial protein
0.033
○○○○○ 0.45
0.449722671935012
Escherichia coli M12
CO715_00940
ATI04423.1
471 aa
tryptophanase
0.044
○○○○○ 0.45
0.449931317949261
Escherichia coli M12
CO715_13295
ATI06597.1
324 aa
oxidoreductase
0.047
○○○○○ 0.45
0.449931317949261
Escherichia coli M12
CO715_20330
ATI07864.1
283 aa
taurine dioxygenase
0.014
○○○○○ 0.45
0.452226424105999
Escherichia coli M12
CO715_18440
ATI07523.1
357 aa
hypothetical protein
0.002
○○○○○ 0.45
0.453686946205741
Escherichia coli M12
CO715_14920
ATI06891.1
328 aa
autoinducer 2 ABC transporter substrate-binding protein
0.021
○○○○○ 0.45
0.453686946205741
Escherichia coli M12
CO715_06230
ATI05352.1
865 aa
fimbrial protein
6.2e-6
○○○○○ 0.45
0.45389559221999
Escherichia coli M12
CO715_07955
ATI05650.1
180 aa
type 1 fimbrial protein subunit FimA
0.033
○○○○○ 0.45
0.454521530262736
Escherichia coli M12
CO715_00980
ATI04431.1
802 aa
type III effector
0.024
○○○○○ 0.47
0.467040291117668
Escherichia coli M12
CO715_17175
ATI07296.1
520 aa
type I-E CRISPR-associated protein Cse1/CasA
0.042
○○○○○ 0.47
0.471630503431143
Escherichia coli M12
CO715_06275
ATI05360.1
561 aa
multidrug ABC transporter ATP-binding protein
0.022
○○○○○ 0.49
0.49040864471354
Escherichia coli M12
CO715_03380
ATI04861.1
879 aa
outer membrane usher protein
0.019
○○○○○ 0.5
0.500840945425983
Escherichia coli M12
CO715_01435
ATI04509.1
500 aa
glutamate/gamma-aminobutyrate family transporter YjeM
0.03
○○○○○ 0.5
0.502092821511477
Escherichia coli M12
CO715_17765
ATI07403.1
686 aa
EscV/YscV/HrcV family type III secretion system export apparatus protein
0.0047
○○○○○ 0.6
0.595566235894966
Escherichia coli M12
CO715_24630
ATI08613.1
463 aa
L-selenocysteinyl-tRNA(Sec) synthase
0.0089
○○○○○ 0.61
0.606833120664405
Escherichia coli M12
CO715_16020
ATI07084.1
416 aa
fimbrial protein
0.017
○○○○○ 0.61
0.610171456892387
Escherichia coli M12
CO715_15290
ATI06957.1
72 aa
hypothetical protein
0.018
○○○○○ 0.62
0.620186465576332
Escherichia coli M12
CO715_16445
ATI07163.1
243 aa
UDP pyrophosphate phosphatase
0.015
○○○○○ 0.63
0.628323660132038
Escherichia coli M12
CO715_14510
ATI06815.1
452 aa
PTS galactitol transporter subunit IIC
0.026
○○○○○ 0.63
0.62978418223178
Escherichia coli M12
CO715_14450
ATI06803.1
499 aa
Low-affinity inorganic phosphate transporter 1
0.0036
○○○○○ 0.63
0.632079288388517
Escherichia coli M12
CO715_03590
ATI04902.1
400 aa
acetate kinase
0.008
○○○○○ 0.64
0.637921376787485
Escherichia coli M12
CO715_23100
ATI08361.1
368 aa
N-acetylneuraminate epimerase
0.00015
○○○○○ 0.64
0.638338668815983
Escherichia coli M12
CO715_15345
ATI06967.1
419 aa
L-rhamnose isomerase
0.012
○○○○○ 0.64
0.638964606858729
Escherichia coli M12
CO715_02570
ATI04715.1
565 aa
transcriptional regulator HilA
0.016
○○○○○ 0.64
0.640425128958471
Escherichia coli M12
CO715_12250
ATI06411.1
292 aa
glucose-1-phosphate thymidylyltransferase RfbA
0.0096
○○○○○ 0.64
0.642720235115209
Escherichia coli M12
CO715_08035
ATI05665.1
261 aa
(S)-ureidoglycine aminohydrolase
0.003
○○○○○ 0.64
0.642928881129458
Escherichia coli M12
CO715_15485
ATI08828.1
224 aa
hypothetical protein
1.6e-6
○○○○○ 0.64
0.643763465186453
Escherichia coli M12
CO715_12200
ATI06403.1
400 aa
sugar transporter
0.05
○○○○○ 0.64
0.644806695257698
Escherichia coli M12
CO715_18525
ATI08858.1
1524 aa
outer membrane autotransporter barrel domain-containing protein
6.6e-5
○○○○○ 0.65
0.645015341271946
Escherichia coli M12
CO715_14350
ATI06783.1
188 aa
outer membrane protein slp
0.0036
○○○○○ 0.65
0.645849925328942
Escherichia coli M12
CO715_15040
ATI06913.1
284 aa
AraC family transcriptional regulator
0.046
○○○○○ 0.65
0.645849925328942
Escherichia coli M12
CO715_02225
ATI04653.1
728 aa
hypothetical protein
0.0034
○○○○○ 0.65
0.646475863371688
Escherichia coli M12
CO715_02210
ATI04650.1
543 aa
hypothetical protein
0.00016
○○○○○ 0.65
0.647519093442933
Escherichia coli M12
CO715_13080
ATI08805.1
309 aa
TIGR01212 family radical SAM protein
0.047
○○○○○ 0.65
0.647936385471431
Escherichia coli M12
CO715_12820
ATI06513.1
414 aa
tryptophan permease
0.024
○○○○○ 0.65
0.649188261556924
Escherichia coli M12
CO715_20185
ATI07837.1
1047 aa
exonuclease subunit SbcC
0.046
○○○○○ 0.65
0.651900659742159
Escherichia coli M12
CO715_06270
ATI05359.1
385 aa
anaerobic sulfatase maturase
0.0094
○○○○○ 0.66
0.656073580027136
Escherichia coli M12
CO715_16670
ATI07205.1
466 aa
GABA permease
2.0e-5
○○○○○ 0.66
0.658368686183874
Escherichia coli M12
CO715_17900
ATI07425.1
455 aa
guanine/hypoxanthine permease GhxQ
0.025
○○○○○ 0.66
0.664002128568593
Escherichia coli M12
CO715_06180
ATI05342.1
315 aa
aldo/keto reductase
0.048
○○○○○ 0.67
0.666088588711082
Escherichia coli M12
CO715_11200
ATI06218.1
236 aa
TVP38/TMEM64 family protein
0.045
○○○○○ 0.67
0.666714526753828
Escherichia coli M12
CO715_17855
ATI07416.1
541 aa
hypothetical protein
0.045
○○○○○ 0.67
0.667131818782326
Escherichia coli M12
CO715_00620
ATI04370.1
402 aa
oxalate/formate antiport family MFS transporter
1.1e-6
○○○○○ 0.67
0.668383694867819
Escherichia coli M12
CO715_25225
ATI08683.1
290 aa
50S ribosome-binding GTPase
0.022
○○○○○ 0.67
0.668383694867819
Escherichia coli M12
CO715_18410
ATI07518.1
418 aa
nucleoside permease NupG
0.0047
○○○○○ 0.67
0.669009632910565
Escherichia coli M12
CO715_21420
ATI08060.1
312 aa
pseudouridine-5'-phosphate glycosidase
0.029
○○○○○ 0.67
0.669844216967561
Escherichia coli M12
CO715_01565
ATI04533.1
512 aa
transcriptional regulator CadC
4.6e-5
○○○○○ 0.67
0.671722031095801
Escherichia coli M12
CO715_01580
ATI04536.1
715 aa
lysine decarboxylase inducible
0.00025
○○○○○ 0.67
0.672556615152796
Escherichia coli M12
CO715_14380
ATI06789.1
429 aa
arsenical efflux pump membrane protein ArsB
0.017
○○○○○ 0.68
0.675894951380778
Escherichia coli M12
CO715_15390
ATI06975.1
457 aa
two-component system sensor histidine kinase CpxA
0.013
○○○○○ 0.68
0.677564119494769
Escherichia coli M12
CO715_23730
ATI08452.1
336 aa
hypothetical protein
3.3e-10
○○○○○ 0.68
0.677981411523267
Escherichia coli M12
CO715_01035
ATI04440.1
356 aa
fimbrial protein
0.0035
○○○○○ 0.68
0.679859225651506
Escherichia coli M12
CO715_23640
ATI08438.1
494 aa
alpha/beta hydrolase
0.00059
○○○○○ 0.68
0.680276517680004
Escherichia coli M12
CO715_01045
ATI04441.1
243 aa
fimbrial chaperone protein
0.0047
○○○○○ 0.68
0.680693809708502
Escherichia coli M12
CO715_17590
ATI07372.1
253 aa
2-deoxy-D-gluconate 3-dehydrogenase
0.0056
○○○○○ 0.68
0.681528393765497
Escherichia coli M12
CO715_23885
ATI08482.1
234 aa
type 1 fimbrial protein
0.0011
○○○○○ 0.68
0.682362977822493
Escherichia coli M12
CO715_13660
ATI06660.1
167 aa
N-acetyltransferase
0.037
○○○○○ 0.68
0.682362977822493
Escherichia coli M12
CO715_14505
ATI06814.1
502 aa
carbohydrate kinase
5.7e-6
○○○○○ 0.68
0.683406207893737
Escherichia coli M12
CO715_16435
ATI07161.1
968 aa
RNA polymerase-associated protein RapA
0.05
○○○○○ 0.68
0.684032145936484
Escherichia coli M12
CO715_01810
ATI04577.1
91 aa
hypothetical protein
0.03
○○○○○ 0.68
0.684240791950732
Escherichia coli M12
CO715_01915
ATI04595.1
549 aa
Na+/H+ antiporter
0.00038
○○○○○ 0.68
0.68465808397923
Escherichia coli M12
CO715_02100
ATI04630.1
514 aa
maltose ABC transporter permease MalF
0.016
○○○○○ 0.69
0.685075376007728
First
Previous
30
Next
Last
Retrieved entries 2,901–3,000 out of 3,550 total in 57.8 ms
(
Link to these results
)